PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462853180 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | NAC | ||||||||
Protein Properties | Length: 138aa MW: 15975.2 Da PI: 10.0712 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 101.1 | 1.6e-31 | 16 | 93 | 52 | 128 |
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +ekewyf+++rdkky+++ r+nr+t +g+Wkatg+d++++s+ +++ +glkk+Lvfykgra kg ktdW+mheyrl 462853180 16 SIGEKEWYFYCPRDKKYRNSGRPNRVTGAGFWKATGTDRPIYSSeGTKCIGLKKSLVFYKGRAAKGIKTDWMMHEYRL 93 34789**************************************956667***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 33.352 | 1 | 117 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.96E-32 | 16 | 96 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.2E-14 | 20 | 93 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence Send to blast |
MPLRYWNFCV NRELASIGEK EWYFYCPRDK KYRNSGRPNR VTGAGFWKAT GTDRPIYSSE 60 GTKCIGLKKS LVFYKGRAAK GIKTDWMMHE YRLLSLIDPT LPKKTRDKNI AAEAQQHQKL 120 NSQDGSSSYP DIIEDSRT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-31 | 15 | 94 | 66 | 143 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-31 | 15 | 94 | 66 | 143 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-31 | 15 | 94 | 66 | 143 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-31 | 15 | 94 | 66 | 143 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-31 | 15 | 94 | 69 | 146 | NAC domain-containing protein 19 |
3swm_B | 2e-31 | 15 | 94 | 69 | 146 | NAC domain-containing protein 19 |
3swm_C | 2e-31 | 15 | 94 | 69 | 146 | NAC domain-containing protein 19 |
3swm_D | 2e-31 | 15 | 94 | 69 | 146 | NAC domain-containing protein 19 |
3swp_A | 2e-31 | 15 | 94 | 69 | 146 | NAC domain-containing protein 19 |
3swp_B | 2e-31 | 15 | 94 | 69 | 146 | NAC domain-containing protein 19 |
3swp_C | 2e-31 | 15 | 94 | 69 | 146 | NAC domain-containing protein 19 |
3swp_D | 2e-31 | 15 | 94 | 69 | 146 | NAC domain-containing protein 19 |
4dul_A | 2e-31 | 15 | 94 | 66 | 143 | NAC domain-containing protein 19 |
4dul_B | 2e-31 | 15 | 94 | 66 | 143 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462853180 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010937354.1 | 2e-57 | putative NAC domain-containing protein 94 | ||||
Refseq | XP_020184786.1 | 1e-57 | protein FEZ-like | ||||
Swissprot | Q9FIW5 | 4e-49 | NAC94_ARATH; Putative NAC domain-containing protein 94 | ||||
TrEMBL | A0A453KYM9 | 8e-58 | A0A453KYM9_AEGTS; Uncharacterized protein | ||||
TrEMBL | W1NG41 | 8e-57 | W1NG41_AMBTC; Uncharacterized protein | ||||
STRING | ERM94456 | 1e-57 | (Amborella trichopoda) | ||||
STRING | Traes_5AL_F35B9FF8E.1 | 1e-58 | (Triticum aestivum) | ||||
STRING | Traes_5BL_38DFDFE41.1 | 1e-58 | (Triticum aestivum) | ||||
STRING | Traes_5DL_0713E8429.2 | 1e-58 | (Triticum aestivum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39820.1 | 2e-51 | NAC domain containing protein 94 |