PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462852590
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 562aa    MW: 61920.2 Da    PI: 4.1575
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462852590genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.86.6e-131054248
        NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
               ppGfrF+Ptdeelv ++Lk+++++ + +    i++vd+yk++P++Lp
  462852590 10 PPGFRFSPTDEELVLYFLKRRITSGRPTP--YIADVDVYKSHPSHLP 54
               8*********************9999555..6**************8 PP

2NAM29.91.6e-095583100128
        NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                vg kktLv+++grap+ge+tdWvm ey++
  462852590  55 VGNKKTLVYHHGRAPRGERTDWVMYEYTI 83 
                89*************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100514.8791106IPR003441NAC domain
SuperFamilySSF1019411.7E-255106IPR003441NAC domain
PfamPF023655.8E-111083IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 562 aa     Download sequence    Send to blast
MESTPPRRWP PGFRFSPTDE ELVLYFLKRR ITSGRPTPYI ADVDVYKSHP SHLPVGNKKT  60
LVYHHGRAPR GERTDWVMYE YTILADAFPQ AAGACEAYAL YKLFQKSGAG PKNGEQYGAP  120
FREEDWLDDD EEEQGLSAGA VAHPVATVQQ QADRELPIVD LEELLAEFGS DQEQVEEQFD  180
FATPASSQGQ LHHVHGQGWL DNAGDKADIV DTSTGSGAVP VPENACTDLP LGDIEEFLMR  240
ISDDQQNAEL LSDFSSSVPE LQLQCDDHQV WLDADREGEF CATDPITGSG SVVTAGYTGA  300
ELPVGDLEGL LLQIANDREM VQPVSDLPTP FPHHNFNQVD IKGFQSPGDP VGSMSYNCQD  360
ADEFLEINDF FDLDEVEHNM NSTATEHLIS ATNGMFGNLE YSDAPSSLTG HFDTDEVVAE  420
NQFVDFGTLN LHTGNEPLNQ SSNASQTWFN AALSALLDSV PSSPALAAEI ENTVINRTFQ  480
RISSFRSQQA ANEESTVIYR TIQRISSFKS QQDAREEPST PVIKATRSRR LIFVSVLVLL  540
AGVMWTGPAV NFFKGLWKSS ST
Cis-element ? help Back to Top
SourceLink
PlantRegMap462852590
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3555522e-61AK355552.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1022I04.
GenBankAK3624272e-61AK362427.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2005A11.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025802095.10.0NAC domain-containing protein 82-like
TrEMBLA0A1E5UTD40.0A0A1E5UTD4_9POAL; NAC domain-containing protein 16
STRINGPavir.J04800.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91282840
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.11e-33NAC domain containing protein 17