PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462848738
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family STAT
Protein Properties Length: 441aa    MW: 49013.8 Da    PI: 7.0296
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462848738genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT189.83.1e-59251431119
       STAT   1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkkypfle 99 
                l++vl++a+g+pv kd+evvasL+yad+g++veks dd+e+pLLi+++G+e+++ +rp++++rGra+fklkisqLsskcdn+Lfri+f++p++k+ypf+e
  462848738  25 LELVLIDAFGEPV-KDIEVVASLVYADNGTLVEKSrDDSEPPLLITCEGIEYPAISRPIPVIRGRALFKLKISQLSSKCDNKLFRIHFSTPHMKRYPFME 123
                799*********9.*********************9**************************************************************** PP

       STAT 100 avskpirCisrsrntrsssl 119
                a+skpirCisr r++r++++
  462848738 124 AYSKPIRCISRHRTNRPLGS 143
                ***************99865 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.505.107.3E-5334417IPR000980SH2 domain
SuperFamilySSF555501.88E-9337421IPR000980SH2 domain
PROSITE profilePS5000110.33343441IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    Send to blast
MVLKIVYPNN GNILIQPSCR RNFLLELVLI DAFGEPVKDI EVVASLVYAD NGTLVEKSRD  60
DSEPPLLITC EGIEYPAISR PIPVIRGRAL FKLKISQLSS KCDNKLFRIH FSTPHMKRYP  120
FMEAYSKPIR CISRHRTNRP LGSGKQVTSA TTDEIIVLSD GQGFVNADTV IGRLNSHGQS  180
SVGCSHPSMN VKTEDGVAMT VDTNKMVSQN KHARKVVVSK EAHNVMGTDS STSDYESFEA  240
GSSWSGSDGD EVESFSDAVI FRYCLDSTDE RSKFLRGAAP TVNKDALVKL ADQDLEVLRG  300
IAGCGDDIGR NEFERLWYWL YPVATSLSTD KIKNLWDCTV PRWIEGLITR VEAENALRSS  360
KGLLKEPGTF ILRFPTTRSW PHPDAGSLVV TYVGFDNLIH HRLLSLDSSD ARAGSLPDLL  420
LQEPELCRLG RVERLPTAKQ R
Cis-element ? help Back to Top
SourceLink
PlantRegMap462848738
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004983605.10.0SH2 domain-containing protein B isoform X2
TrEMBLA0A368SMT10.0A0A368SMT1_SETIT; Uncharacterized protein
STRINGSi034463m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75473135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.14e-83SH2 domain protein B