PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10015715m
Common NameEUTSA_v10015715mg
Organism
Eutrema salsugineum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family ERF
Protein Properties Length: 256aa    MW: 28691 Da    PI: 8.2373
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10015715mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.6e-182171155
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     +++ GVr+++ +g+WvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  Thhalv10015715m 21 TKFVGVRQRP-SGKWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 71
                     699*******.7*********32...35**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.3E-132171IPR001471AP2/ERF domain
CDDcd000182.34E-332181No hitNo description
SMARTSM003807.0E-392285IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-192279IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.9E-282280IPR001471AP2/ERF domain
PROSITE profilePS5103219.8232279IPR001471AP2/ERF domain
PRINTSPR003674.2E-82334IPR001471AP2/ERF domain
PRINTSPR003674.2E-84561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009723Biological Processresponse to ethylene
GO:0035865Biological Processcellular response to potassium ion
GO:0048528Biological Processpost-embryonic root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MEHQTTQKQK TKEKSKGNNK TKFVGVRQRP SGKWVAEIKD TTQKIRMWLG TFETAEEAAR  60
AYDEAACLLR GSNTRTNFAN HFPNNSQLSL KIRNLLHQKQ SMKQQQQQQQ QKKPISSFAE  120
RSINYNTSTA TSLTTTTTTT TVVPINNVYS PDPSVILQPE NENVLLPYSW PLVSGFNHQV  180
PLTQGGEEAH GHLNNPHPTD PHSGLAEIER QISASLYAMN GANSYFDNMN AEYAIFDPTD  240
PIWDLPSLSQ LFCPT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-151788981Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00521DAPTransfer from AT5G19790Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapThhalv10015715m
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006400539.10.0ethylene-responsive transcription factor RAP2-11
SwissprotQ6J9S11e-138RA211_ARATH; Ethylene-responsive transcription factor RAP2-11
TrEMBLV4LHX70.0V4LHX7_EUTSA; Uncharacterized protein
STRINGXP_006400539.10.0(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM75262641
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-110related to AP2 11
Publications ? help Back to Top
  1. Meng S, et al.
    Arabidopsis NRT1.5 Mediates the Suppression of Nitrate Starvation-Induced Leaf Senescence by Modulating Foliar Potassium Level.
    Mol Plant, 2016. 9(3): p. 461-470
    [PMID:26732494]