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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Thhalv10005469m |
| Common Name | EUTSA_v10005469mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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| Family |
GRAS |
| Protein Properties |
Length: 435aa MW: 48621.6 Da PI: 5.6364 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thhalv10005469m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 319.8 | 5.5e-98 | 31 | 420 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilkf 93
++lLl+cA+a++s+d++laq++++ l++laspdg+++qRla+ +++AL +r + +++ + l++ + ++++ +++++ +l f++++P+++f
Thhalv10005469m 31 EQLLLHCANAIESNDATLAQQIIWVLNNLASPDGNSTQRLASSLLRALISRASTKSPAFA-FLSAASPLSQKTLHRFSVIELaaFVDLTPWHRF 123
79**************************************************99555554.55444444455566666666667********** PP
GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnv 180
++++aN aIl+av+g + vH++D+++++++Q p+L++++a++p ++pp l++T+v+++++ ++ee+g++L +fA++ ++ +ef++
Thhalv10005469m 124 GFIAANAAILDAVQGYSSVHVVDLSLTHCMQIPTLIDSIATKPfkelRPPPLLKLTVVVAESHPpplLGISYEELGSKLVNFAATRNIAMEFRI 217
*******************************************999999***********77668888999*********************** PP
GRAS 181 l...vakrledleleeLrvkp...gEalaVnlvlqlhrlldesvsles.erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysal 267
+ +++ l++l +e+Lr++p +Eal+Vn++++lh+++de+++++s +r+ +Lk +k+l+P++v+++e++ad +s +F r+ + ++y++
Thhalv10005469m 218 IsssYSDGLSSL-IEQLRLDPfvfNEALVVNCHMMLHYIPDETLTSSSpPRSVFLKELKDLNPTIVTLIEEDADFTSRNFISRLRSLFNYMWIP 310
966555566666.9*******************************99999******************************************** PP
GRAS 268 fdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve....eesg 356
+d+ ++ l r se+r+++E+ +g++i nvva+egaer+er e +++W er+++a F+ v +se+aa ++k++l++++ ++g++ + ++ +
Thhalv10005469m 311 YDTADTFLTRGSEQRRWYEAD-IGWKIDNVVAKEGAERVERLEPKSRWFERMRKAQFTGVGFSETAAREVKTMLEEHAaGWGMKRDvdddDDVD 403
*********************.********************************************************9999887754444478 PP
GRAS 357 slvlgWkdrpLvsvSaW 373
+vl+Wk++++v++S+W
Thhalv10005469m 404 RFVLTWKGHSVVFASVW 420
899************** PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 435 aa
Download sequence Send
to blast |
MNKTMILNPT RPVWSGFSSS KSLCGDANCM EQLLLHCANA IESNDATLAQ QIIWVLNNLA 60
SPDGNSTQRL ASSLLRALIS RASTKSPAFA FLSAASPLSQ KTLHRFSVIE LAAFVDLTPW 120
HRFGFIAANA AILDAVQGYS SVHVVDLSLT HCMQIPTLID SIATKPFKEL RPPPLLKLTV 180
VVAESHPPPL LGISYEELGS KLVNFAATRN IAMEFRIISS SYSDGLSSLI EQLRLDPFVF 240
NEALVVNCHM MLHYIPDETL TSSSPPRSVF LKELKDLNPT IVTLIEEDAD FTSRNFISRL 300
RSLFNYMWIP YDTADTFLTR GSEQRRWYEA DIGWKIDNVV AKEGAERVER LEPKSRWFER 360
MRKAQFTGVG FSETAAREVK TMLEEHAAGW GMKRDVDDDD DVDRFVLTWK GHSVVFASVW 420
VPINGVDDVT YIEA*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
