PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010943933.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | NAC | ||||||||
Protein Properties | Length: 269aa MW: 31089.1 Da PI: 5.5532 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 154.3 | 5.4e-48 | 11 | 137 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+eel+++yLk+ + gkkl++ ++i ++++y+++Pw+Lp ++ +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ s+ XP_010943933.1 11 PGFRFHPTEEELLDYYLKRVALGKKLNF-DIIGTLNLYRHDPWELPGLARIGEREWYFFVPRDRKSGNGGRPNRTTERGFWKATGSDRPIRSAad 104 9*************************99.99***************8778899**************************************9877 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++l+glkktLvfy+grap+g++tdWvm+eyrl XP_010943933.1 105 PRRLIGLKKTLVFYEGRAPRGTRTDWVMNEYRL 137 7788***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 56.2 | 9 | 161 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 6.8E-58 | 10 | 161 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.4E-25 | 11 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009965 | Biological Process | leaf morphogenesis | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045792 | Biological Process | negative regulation of cell size | ||||
GO:0048281 | Biological Process | inflorescence morphogenesis | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 269 aa Download sequence Send to blast |
MERSGSEMEL PGFRFHPTEE ELLDYYLKRV ALGKKLNFDI IGTLNLYRHD PWELPGLARI 60 GEREWYFFVP RDRKSGNGGR PNRTTERGFW KATGSDRPIR SAADPRRLIG LKKTLVFYEG 120 RAPRGTRTDW VMNEYRLPDA PPSNNAATPK EDIVLCKIYR KATSLKELEQ RAAMGEDMRA 180 PQACMSMVDN ASSDDQENYQ SSSLPLDNGD PKEMKEETQK EVEVTSISIR QVDLPLPELQ 240 VPKYSLDWMQ DPFSTQLRSP WLDQWLPNF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 3e-52 | 11 | 167 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-52 | 11 | 167 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-52 | 11 | 167 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-52 | 11 | 167 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-52 | 11 | 167 | 22 | 174 | NAC domain-containing protein 19 |
3swm_B | 4e-52 | 11 | 167 | 22 | 174 | NAC domain-containing protein 19 |
3swm_C | 4e-52 | 11 | 167 | 22 | 174 | NAC domain-containing protein 19 |
3swm_D | 4e-52 | 11 | 167 | 22 | 174 | NAC domain-containing protein 19 |
3swp_A | 4e-52 | 11 | 167 | 22 | 174 | NAC domain-containing protein 19 |
3swp_B | 4e-52 | 11 | 167 | 22 | 174 | NAC domain-containing protein 19 |
3swp_C | 4e-52 | 11 | 167 | 22 | 174 | NAC domain-containing protein 19 |
3swp_D | 4e-52 | 11 | 167 | 22 | 174 | NAC domain-containing protein 19 |
4dul_A | 3e-52 | 11 | 167 | 19 | 171 | NAC domain-containing protein 19 |
4dul_B | 3e-52 | 11 | 167 | 19 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010943933.2 | 0.0 | NAC domain-containing protein 22 | ||||
Swissprot | Q10S65 | 1e-115 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A2H3ZGV2 | 1e-171 | A0A2H3ZGV2_PHODC; NAC domain-containing protein 22-like isoform X1 | ||||
STRING | XP_008813634.1 | 1e-172 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1770 | 38 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 5e-96 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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