PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010941851.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Dof

Protein Properties

Length: 347aa MW: 36916.4 Da PI: 8.4747

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010941851.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.5	3.4e-39	53	111	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rk k+ XP_010941851.1 53 PQQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKAKA 111 78999***************************************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	8.0E-25	53	107	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	7.5E-33	55	111	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.236	57	111	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	59	95	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence Send to blast
MIQELLGGAL EERKISIPGS LLIDPSSSSS SSTSISSTSL SSNSSSPSTT SEPQQNLRCP 60 RCDSSNTKFC YYNNYNLTQP RHFCKTCRRY WTKGGALRNV PIGGGCRKAK AAPAIAAGGT 120 KFGATKAKPA STDLLARSGI GGGLEHELPS GPILWASPHT SHLMALLRAT SVQNPNPNTH 180 SSPTLNSVRI KEDGAMIGTC LAADKVSILQ SQGLSLDPLG QLPISSNGAL WRNSNQYAYQ 240 QQPQPQQMQQ HSSMFLGEMP SSGIQELYQR IKSSANYCND QLQAVMSNVG CLDSTSSSAT 300 TTMTTTMGTS TATSILEPIP LSAGGEFNYW NPALNWSDLP TTNGSFP

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence Send to blast

MIQELLGGAL EERKISIPGS LLIDPSSSSS SSTSISSTSL SSNSSSPSTT SEPQQNLRCP  60
RCDSSNTKFC YYNNYNLTQP RHFCKTCRRY WTKGGALRNV PIGGGCRKAK AAPAIAAGGT  120
KFGATKAKPA STDLLARSGI GGGLEHELPS GPILWASPHT SHLMALLRAT SVQNPNPNTH  180
SSPTLNSVRI KEDGAMIGTC LAADKVSILQ SQGLSLDPLG QLPISSNGAL WRNSNQYAYQ  240
QQPQPQQMQQ HSSMFLGEMP SSGIQELYQR IKSSANYCND QLQAVMSNVG CLDSTSSSAT  300
TTMTTTMGTS TATSILEPIP LSAGGEFNYW NPALNWSDLP TTNGSFP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010941851.1	0.0	dof zinc finger protein 2
TrEMBL	A0A2H3Y2U9	1e-171	A0A2H3Y2U9_PHODC; dof zinc finger protein DOF2.2-like
STRING	XP_008792599.1	1e-172	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7710	31	44

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28810.2	1e-31	Dof family protein