PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010941521.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family MYB
Protein Properties Length: 422aa    MW: 46111 Da    PI: 7.0756
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010941521.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.91.3e-141663148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+ Ed +l ++v++ G g+W+++ +  g+ R++k+c++rw ++l
   XP_010941521.1 16 KGPWTAAEDAILMEYVRKQGEGNWNAVQKNTGLARCGKSCRLRWANHL 63
                     79******************************************9986 PP
2Myb_DNA-binding513.3e-1669112146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +g+++++E++l++++++qlG++ W++ a++++ gRt++++k++w++
   XP_010941521.1  69 KGAFSPDEELLILRLHAQLGNK-WARMAAHLP-GRTDNEIKNYWNT 112
                      799*******************.*********.***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.9921163IPR017930Myb domain
SuperFamilySSF466893.67E-2913110IPR009057Homeodomain-like
SMARTSM007171.1E-111565IPR001005SANT/Myb domain
PfamPF002498.4E-141663IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.0E-221770IPR009057Homeodomain-like
CDDcd001677.83E-101863No hitNo description
PROSITE profilePS5129424.65864118IPR017930Myb domain
SMARTSM007171.4E-1568116IPR001005SANT/Myb domain
PfamPF002494.8E-1569112IPR001005SANT/Myb domain
CDDcd001671.85E-1171112No hitNo description
Gene3DG3DSA:1.10.10.601.4E-2471117IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MTRSDGGGSG NGGLKKGPWT AAEDAILMEY VRKQGEGNWN AVQKNTGLAR CGKSCRLRWA  60
NHLRPNLKKG AFSPDEELLI LRLHAQLGNK WARMAAHLPG RTDNEIKNYW NTRIKRRQRA  120
GLPLYPPDVQ RELAFKRQRL HHNHPPSTNP PAPLLTNNTT ITHFSSTSSS LLDPTGYFST  180
PMLTTFNAPL PLPGHHLHFP SSGMFHTQQQ QQQQMEFNLG SFGLNSLPLP PPVFPNKMEL  240
PSTQMFTALP FSGGLLDTLL QEVQPGGHLQ SNGLLPELVS GDQDVKLSHL CGGGVGGEGG  300
GSRGVTLPQD GLMESAVKWT DSNWSIGTQM KKEPTENDTS PVEEDISQLL NMIPTVNAAA  360
ATPVSEWYKS DSGEISNGHS SVVTEEHIGL EMQQLVSSLS NPPEGPDLSI RSYPWSNMPG  420
IC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A2e-28141175107B-MYB
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010941521.10.0transcription factor MYB101 isoform X1
TrEMBLA0A2H3WXZ80.0A0A2H3WXZ8_PHODC; transcription factor MYB101-like
STRINGXP_008775421.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP74203750
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G32460.17e-68myb domain protein 101