PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010941426.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family BES1
Protein Properties Length: 624aa    MW: 69843.7 Da    PI: 4.696
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010941426.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822148.94.1e-46431922134
          DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr..........kgskpl....eeaeaa 82 
                     g+grk+++kE+E++k+RER+RRai++++++GLR++Gn+ lp+raD+n+Vl+AL+reAGw+ve+DGttyr          +   p+      + + 
  XP_010941426.1  43 GKGRKEREKEKERTKLRERHRRAITSRMLTGLRQYGNFLLPARADMNDVLAALAREAGWIVEADGTTYRpssvtapltvA--APPppppPPHTQL 135
                     89*******************************************************************77666665431..2223455566777 PP

          DUF822  83 gssasaspesslq.sslkssalaspvesysaspksssfpspssldsislasa....a 134
                       +  +s+es+l+ +slk+s++++ ++s+++ ++ ++++sp+slds+ +a+     +
  XP_010941426.1 136 APFPVRSIESPLSaNSLKNSSMKASLDSQASLLRIDESLSPASLDSVVVAERdtrgE 192
                     88899********99********************************9998744440 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.8E-4743201IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514455.44E-26222306IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.802.3E-27225304IPR013781Glycoside hydrolase, catalytic domain
PfamPF013738.4E-11231304IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.3E-7262276IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.3E-7283301IPR001554Glycoside hydrolase, family 14
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 624 aa     Download sequence    Send to blast
MNVKQDVEQQ QHSDHSSDQY PQPPPQRRPR GFAAAAAAAG GSGKGRKERE KEKERTKLRE  60
RHRRAITSRM LTGLRQYGNF LLPARADMND VLAALAREAG WIVEADGTTY RPSSVTAPLT  120
VAAPPPPPPP PHTQLAPFPV RSIESPLSAN SLKNSSMKAS LDSQASLLRI DESLSPASLD  180
SVVVAERDTR GEKYANASPI NSPECVEADQ LMRESAEGEG DFAGTPYIPV YVMLPTSIVN  240
SYCQLVDVEA TRQELRHLKS LNVDGVVVDC WWGIVEGWSP HKYEWSGYRD LFNIIREFEL  300
KLQVYPVMPS PKVLWHQNRE LAIMLHVKVS ISKSTELYLK VLPIKAEQDE YEVADRDIRT  360
TQGTEQIDPS SAYVVDNVPT TQNFRHAKDQ FPTVDLDVAG VTIRQSLIYI SIDNIVYIDN  420
RLFEEDDIRS EDEMDFDPQQ ADTSTDIGWP PMEEHPNLGV FEAPSGIFRS FDWTAVNSDS  480
LTRIHHLAHP DSLSTSGRVI QDNCTSILHA VDEHARISTD IHDHDRDFPS FNSYTPSPMY  540
MHDDVTQFQS VEKTAAHFKY AAAEYERSSE DLTEGLSEAQ QQAQEATQVE HGIEEHKGLS  600
EAQQYVYEAI GVDMVPSMVP SCGT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1fa2_A1e-152273031288BETA-AMYLASE
5wqs_A1e-152273031288Beta-amylase
5wqu_A1e-152273031288Beta-amylase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21413663
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45300.11e-83beta-amylase 2