PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010941166.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | TALE | ||||||||
Protein Properties | Length: 573aa MW: 63723.4 Da PI: 7.9897 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 27.4 | 5.9e-09 | 353 | 390 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + XP_010941166.1 353 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 390 664459******************************88 PP | |||||||
2 | BELL | 110.7 | 8.6e-36 | 217 | 285 | 4 | 72 |
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 elq++kakLls+leeVd+ Y++y++q+++v+ssFeavag g+a++Y +lA+ka+SrhFrcL+d i++qi XP_010941166.1 217 ELQRRKAKLLSMLEEVDRGYRKYCKQMRVVVSSFEAVAGEGAATVYSRLASKAMSRHFRCLRDGIVGQI 285 89*****************************************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 3.5E-56 | 152 | 283 | IPR006563 | POX domain |
Pfam | PF07526 | 8.2E-46 | 158 | 281 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.115 | 331 | 394 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 5.7E-28 | 333 | 410 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 5.63E-11 | 334 | 395 | No hit | No description |
SMART | SM00389 | 1.0E-8 | 334 | 398 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 1.71E-17 | 335 | 402 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 7.4E-18 | 351 | 390 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 573 aa Download sequence Send to blast |
MMAHESHYAE FYAGGHPAIQ SFEPNHDLFG PQGGMEMLGP PSKHPSSNLG RGFIPPGFLE 60 ASNKNFMFST EAAAPTSPWQ VDDSSLRSLF PCQGAEQPGG RLLLSLFNPK PSDAIGVPQS 120 FHQSDSRDVL LSRAESSHQQ QVFMQEGRVF NSQQPFQLKN SKYLIPAKEL LNEFCSLGGE 180 ISSKKRSQKA SQGEEGGPSS SSSSLWNQSL NSMDLLELQR RKAKLLSMLE EVDRGYRKYC 240 KQMRVVVSSF EAVAGEGAAT VYSRLASKAM SRHFRCLRDG IVGQIRAMKK AIGEKDSIAL 300 GTTRGETPRL KLLDQCLRQE KAFQQAGMME SHPWRPQRGL PERSVTILRA WLFEHFLHPY 360 PSDVDKHILA RQTGLSRSQV SNWFINARVR LWKPMIEEMY SQEMNEHNNQ SSHAATSHED 420 NTNRNPNHNF SLNQKPAPGQ LLNDSDSLSS IINSSHHSDE KATINVKTSQ DHNPEHQVPR 480 TESFGAVGRD ISSYSSCGNQ NLRSGVSLTL GLQQNSGVGM SLSFSPASQH SLLFSREHMD 540 DGQQVQFSIL DGEARSLPYR NMMGAQLLHD LAG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3k2a_A | 8e-16 | 340 | 398 | 5 | 63 | Homeobox protein Meis2 |
3k2a_B | 8e-16 | 340 | 398 | 5 | 63 | Homeobox protein Meis2 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Plays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269|PubMed:12244239, ECO:0000269|PubMed:17693535, ECO:0000269|PubMed:22786869}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010941166.1 | 0.0 | homeobox protein BEL1 homolog | ||||
Swissprot | Q38897 | 1e-121 | BEL1_ARATH; Homeobox protein BEL1 homolog | ||||
TrEMBL | A0A3Q0I8Z3 | 0.0 | A0A3Q0I8Z3_PHODC; homeobox protein BEL1 homolog | ||||
STRING | XP_008794767.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6398 | 35 | 47 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41410.1 | 1e-116 | TALE family protein |
Publications ? help Back to Top | |||
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