PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010940770.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family MYB_related
Protein Properties Length: 137aa    MW: 15574.5 Da    PI: 9.2689
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010940770.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.32.4e-1571116247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++WT+eE+ l++++   +G+g+Wk+I+r+   +Rt  q+ s+ qk+
   XP_010940770.1  71 KPWTEEEHRLFLQGLVTYGKGDWKSISRHSVVTRTSLQVASHAQKF 116
                      58******************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.4E-1065116IPR009057Homeodomain-like
PROSITE profilePS5129418.50965121IPR017930Myb domain
SuperFamilySSF466897.48E-1766121IPR009057Homeodomain-like
SMARTSM007171.7E-1169119IPR001005SANT/Myb domain
PfamPF002496.7E-1271115IPR001005SANT/Myb domain
TIGRFAMsTIGR015576.1E-1671120IPR006447Myb domain, plants
CDDcd001671.65E-1072117No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MASSHDIGLS QAEWSPLEEM VLTLKDELQK EEDGNSGDGC GMDMAPEQCP PKGQNTSSGS  60
RRHGQKRRKA KPWTEEEHRL FLQGLVTYGK GDWKSISRHS VVTRTSLQVA SHAQKFFIRQ  120
KQDMERKRKS IHDITNP
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010940770.11e-99transcription factor DIVARICATA-like
SwissprotQ8S9H71e-27DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A3Q0I0I61e-42A0A3Q0I0I6_PHODC; transcription factor DIVARICATA-like
STRINGXP_008789580.12e-43(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP144181825
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.15e-30MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]