PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010940614.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family TALE
Protein Properties Length: 766aa    MW: 83053.9 Da    PI: 7.0847
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010940614.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox283.7e-095846162254
                     SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     ++yp+ +++  LA+++gL+ +qV++WF N R +
  XP_010940614.1 584 HPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 616
                     89*****************************88 PP
2BELL107.77.1e-35437505472
            BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     e+q+kkakLl +leeV++rYkqy++q+q+v+s+Fe vagl sa+pY+slAlk++S++Frc+++ai++q+
  XP_010940614.1 437 EIQQKKAKLLYMLEEVCRRYKQYHQQVQMVVSAFESVAGLSSATPYASLALKTVSKNFRCMRNAISDQL 505
                     89****************************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.3E-47341503IPR006563POX domain
PfamPF075265.4E-44346502IPR006563POX domain
PROSITE profilePS5007111.742557620IPR001356Homeobox domain
SMARTSM003896.1E-9560624IPR001356Homeobox domain
CDDcd000868.83E-12560621No hitNo description
SuperFamilySSF466891.03E-16562626IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.7E-27563624IPR009057Homeodomain-like
PfamPF059204.5E-18577616IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010076Biological Processmaintenance of floral meristem identity
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010223Biological Processsecondary shoot formation
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0010229Biological Processinflorescence development
GO:0048645Biological Processorgan formation
GO:0080006Biological Processinternode patterning
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 766 aa     Download sequence    Send to blast
MNSLRQEPHV AQQSRREKLR VQHSPCQPPT HRQFPGSSAG NSDPIPDLAP VRDVYYPASA  60
MLDLSARAHN LPLAGAEASM IGPLPPSFHE ASGSLTRAGD PPSPCLWRGQ PNCDWMVPSF  120
VAAGSGAPAM ITNPLVSPSV CHPKPGFLGC RDASSELSNQ ETHQQQYGDL HFPSSQFYHH  180
GLQEVVTSSS STAGNHGHEL ASIVQPSSVR EPGHPCSWVD SGNELLLLPS YGEQPNTVWV  240
SRPPAQWNAE GGFARGKVVG EVFNTVGSEG GTQGLSLSLN PVADLPVGQL GERFGLPNEA  300
GQSGPHPKSS ICDRGYGVSL QGIVSSSVDA RRGAGPLGPF TGYSTILKSS KFLKPAQQLL  360
DEFCSAVTGP KLLEHRDEGG RSCQVASADR GDAVVGEKEN SGRRGHPAVS SSSPNDSMEG  420
GGEGGVSGEA SQSHHPEIQQ KKAKLLYMLE EVCRRYKQYH QQVQMVVSAF ESVAGLSSAT  480
PYASLALKTV SKNFRCMRNA ISDQLRRISK GLGEEFMSSP SSSRGETITT PKFKHINQSF  540
PEQKAGENSL GFMGQNQPVW RPQRGLPERA VAVLRAWLFD HFLHPYPTDT DKHMLATQTG  600
LSRNQVSNWF INARVRLWKP MVEEIHMLET KGMKGVDLNS GNRSDANKPP MDDAGRPSNG  660
QRPESECNKP LHCCSSMEPL LNDEGSQSME QWHCDKRSRM DECGMQPSMD GNLISFGTYQ  720
GAMDIGGLGA VSLTLGLRQE GGQQQQQQQQ QQMRHFGSQM LRDFVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A3e-15566623158Homeobox protein Meis1
4xrs_B3e-15566623158Homeobox protein Meis1
5bng_A3e-15566624159Homeobox protein Meis2
5bng_B3e-15566624159Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010940613.10.0BEL1-like homeodomain protein 2
RefseqXP_010940614.10.0BEL1-like homeodomain protein 2
TrEMBLA0A2H3XVX90.0A0A2H3XVX9_PHODC; BEL1-like homeodomain protein 9 isoform X2
STRINGXP_008789566.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27990.19e-87BEL1-like homeodomain 8