PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010940118.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 151aa    MW: 17082.2 Da    PI: 9.0916
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010940118.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.38.2e-143088563
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                    ++++r+ +NRe+ArrsR RK++ ++ L   v  L +eN++    l++ ++ +  +++++
  XP_010940118.1 30 RKQKRMLSNRESARRSRMRKQKHLDDLMAQVGHLMKENSQILAALNTTTQRYLGMEADN 88
                    79***************************************999999999887777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-102176No hitNo description
SMARTSM003385.9E-172690IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.7492891IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.56E-123081No hitNo description
PfamPF001707.0E-113081IPR004827Basic-leucine zipper domain
CDDcd147027.31E-193181No hitNo description
PROSITE patternPS0003603348IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MASSSGTSSG SSQLPNSGSE EDLQALMHQR KQKRMLSNRE SARRSRMRKQ KHLDDLMAQV  60
GHLMKENSQI LAALNTTTQR YLGMEADNSV LRTQMTELST RLQSLNEVLY YMNCGGNHGF  120
GPNDDSFTRP WSLMAENSQP IMASVDMFQY R
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14249RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010940118.11e-109bZIP transcription factor 11
SwissprotC0Z2L57e-39BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A2H3YAN83e-77A0A2H3YAN8_PHODC; bZIP transcription factor 11-like
STRINGXP_008795969.15e-78(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44593367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34590.14e-39G-box binding factor 6
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]