PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010938165.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family CAMTA
Protein Properties Length: 1104aa    MW: 122865 Da    PI: 6.3607
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010938165.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1174.11.9e-54211363117
            CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 
                     +e ++rwl+++ei++iL n+++++lt +++ rp  gsl+L++rk +ryfrkDG++w+kk+dgktvrE+hekLK g+v+vl+cyYah+e+n++fqr
  XP_010938165.1  21 QEaQTRWLRPSEICEILRNYRRFNLTPDPPYRPAGGSLFLFDRKALRYFRKDGHNWRKKRDGKTVREAHEKLKSGSVDVLHCYYAHGEDNENFQR 115
                     5559******************************************************************************************* PP

            CG-1  97 rcywlLeeelekivlvhylev 117
                     r+yw+L+ +le+ivlvhy++v
  XP_010938165.1 116 RSYWMLDGQLEHIVLVHYRDV 136
                     *******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143780.80316142IPR005559CG-1 DNA-binding domain
SMARTSM010762.7E-7719137IPR005559CG-1 DNA-binding domain
PfamPF038591.4E-4822136IPR005559CG-1 DNA-binding domain
CDDcd001020.00326529616No hitNo description
SuperFamilySSF812962.27E-15530615IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.202.8E-14710825IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484031.46E-14713823IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029716.122719834IPR020683Ankyrin repeat-containing domain
CDDcd002045.64E-13719821No hitNo description
PROSITE profilePS5008810.205763795IPR002110Ankyrin repeat
SMARTSM002480.0084763792IPR002110Ankyrin repeat
SMARTSM00248940802831IPR002110Ankyrin repeat
SMARTSM00015420884906IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.254885914IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525403.45E-7931990IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000153.7939961IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.517940969IPR000048IQ motif, EF-hand binding site
PfamPF006120.006942960IPR000048IQ motif, EF-hand binding site
SMARTSM000151.2E-4962984IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.688963991IPR000048IQ motif, EF-hand binding site
PfamPF006122.3E-5965984IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1104 aa     Download sequence    Send to blast
MDFDAHLQIV VWHFDITQIL QEAQTRWLRP SEICEILRNY RRFNLTPDPP YRPAGGSLFL  60
FDRKALRYFR KDGHNWRKKR DGKTVREAHE KLKSGSVDVL HCYYAHGEDN ENFQRRSYWM  120
LDGQLEHIVL VHYRDVNEGS RSTIPHLPSI DSGRVHGTQG TQANSALYSS HLNSSTSTTQ  180
ASYDSSSSAA DWNGQAPSSE FEDADSGGEF GIGSLTDSVS WSGFQIASLA GNDLAEENTV  240
GCSGSSQLYA RGFVNTAGSS IDPSFVNQVP LQNFLLSEDQ QKIHGASQGA GSFGGVRFND  300
PSSFAGWPDV LSIRGRNGNM QEQNISFGHP NCPDNMQKGM VDSESNDNRI ATYVTDGGCN  360
VIGNALTQFF TEVGKRNDQV KEENTENVNS FDDEDLVKES THMYQMPHDD LSHVAVEFKS  420
NSGSRWNISV PDQPLEYETE VSNTSNEPLK SDADNDEHGD LKKLDSFGRW MNKEIGKDCN  480
DSLMASDSGN YWNALGTQND GKEVSSLPRH MQLDIDSLGP SLSQEQLFSI VDFSPDWAYS  540
GVETKVLIAG TFIGSVEPTS IKWCCMFGEL EVPAEVLTTN VLHCRAPTHA PGRVPFYITR  600
SDRLACSEIR EFEYRENLSG VSLVSKSEPE DEIYLQVRFA KLLSLGVDRS KLFCSVENCS  660
KCSLKQKLFL MLNEEENGWK KIEKDSKVFQ GFDKNPRDAL IQKLLKGKLY EWLVCKAHEE  720
GRGPNILDEE GQGAIHLAGA LGYDWAMAPI VTAGVSPSFR DARGRTGLHW AAYYGREETV  780
VTLIRLGAAP GAVEDPTSKF PHGQTAADLA SSRGHKGIAG YVAEADLTSH LSSLSLEGSV  840
TDSVSATLAA QKTIETIQDH NVDSLDGNEG EQLSLRGSLA AVMNSAQAAA RIQAAFRLHS  900
FRQRQLRESK DEEAESLDDI MVLSSLNNKF HRISHFNEAL HTAAVKIQQK YRGWKGRKEF  960
LKIRDRIVKI QAHVRGHQVR KHYKKVVWSV SIVEKAILRW RRKGAGLRGF RAESASGDVE  1020
HGAGKTDEYD FLRLGRRQKA AGVEKALARV RSMARNPEAR DQYMRLVACS RKSKLGDEEN  1080
PSAQVHNSGE EKKIGEDLRA TMIH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010938166.10.0calmodulin-binding transcription activator 1 isoform X1
TrEMBLA0A2H3Y4H50.0A0A2H3Y4H5_PHODC; calmodulin-binding transcription activator 1-like
STRINGXP_008793313.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60838140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.21e-164Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains