PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010937909.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Trihelix
Protein Properties Length: 302aa    MW: 33774.6 Da    PI: 7.0218
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010937909.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix41.92.6e-1327111186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W++    aLiea  ++  +l+rg+l++++W+ev++++     + ++ +++ +qCk++++ l+k+yk +k   +       s++p+f++l+
  XP_010937909.1  27 CWSEGASEALIEAWGDRYLQLSRGNLRQKDWKEVADAVndrqeALGKTRKTDVQCKNRIDTLKKKYKLEKSKPGP------SQWPLFSRLD 111
                     7*************************************9988444556779****************99988886......58****9996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.7E-2425111No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010468Biological Processregulation of gene expression
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MDPGPHGYRH HPTPPTHAGG AGGREDCWSE GASEALIEAW GDRYLQLSRG NLRQKDWKEV  60
ADAVNDRQEA LGKTRKTDVQ CKNRIDTLKK KYKLEKSKPG PSQWPLFSRL DLLIGPNSAP  120
SLKKPNPSGA PFIKAHYPQP NSHRHPSLTF TIKPRNPNPN AAVCSDGSMN SPGSSESSRG  180
EFGRVGDDND DEDDEDEDEE DGDNGLSDVV AARKRRRSWG SLGGGGGEEE ALGELARAIV  240
KFAEVYERVE RSKHQQMMEL ERQRMEFAKD IEFQRMQMFM DAQLELEKMK RPKHASGSGK  300
RL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1212216RKRRR
2212217RKRRRS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010937909.10.0trihelix transcription factor ASIL2 isoform X1
TrEMBLA0A2H3XVH91e-174A0A2H3XVH9_PHODC; trihelix transcription factor ASIL2 isoform X4
STRINGXP_008789150.11e-170(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20653279
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05550.15e-31sequence-specific DNA binding transcription factors