PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010937274.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 369aa    MW: 41027.4 Da    PI: 4.6324
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010937274.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.21e-18112161255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++  +++++g
  XP_010937274.1 112 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDVEARRIRG 161
                     69*******.**********954...4************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541716.54E-22112169IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.2E-32112170IPR001471AP2/ERF domain
CDDcd000181.03E-32112171No hitNo description
SMARTSM003806.5E-38112175IPR001471AP2/ERF domain
PROSITE profilePS5103224.236112169IPR001471AP2/ERF domain
PfamPF008471.7E-11113161IPR001471AP2/ERF domain
PRINTSPR003671.1E-11113124IPR001471AP2/ERF domain
PRINTSPR003671.1E-11135151IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MCGGAIISDF IPTPVSSRRP IADYIWPHLN KGGGGGGKKG RKHEVVEIDD DFEADFEDFK  60
DESEEDEEEE IDVKPFAFTA KAPFSGEGSI TLKSGEFNGP AARSAKRKRK NQYRGIRQRP  120
WGKWAAEIRD PRKGVRVWLG TFNTAEEAAR AYDVEARRIR GKKAKVNFPE APASAQKRRH  180
KPNVQAPKPA LAEEQKFDRS LNSLNNPDYD LEVKELTKPE YLNSLSSLES SPPSGGTGLV  240
HFLSDQGSNS IDCLDFGWEH ETKNPEITSF LAPIITEGDE SGLMEHGSPQ KKLKNNSEEA  300
IPADDNSAMK LSEELSAYES YMKFLEIPYL QGSADESIDS LFSCDVAQDG QSTVDLWSFD  360
DLPLENSIF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-21112169260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010937274.10.0ethylene-responsive transcription factor 1
TrEMBLA0A2H3XFS20.0A0A2H3XFS2_PHODC; ethylene-responsive transcription factor 1-like
STRINGXP_008783120.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP103938134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.34e-52related to AP2 2