PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010936039.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | bZIP | ||||||||
Protein Properties | Length: 466aa MW: 49827.2 Da PI: 4.7569 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50.6 | 4.1e-16 | 254 | 310 | 3 | 59 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 + kr+rr+++NRe+ArrsR+RK+a + eLe v +L eN++L k l ++++ + XP_010936039.1 254 DAKRARRMISNRESARRSRRRKQAHLNELEAQVSQLRVENSSLLKSLTDVNQKYNEA 310 68******************************************9999999888765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.8E-12 | 251 | 307 | No hit | No description |
SMART | SM00338 | 5.8E-19 | 252 | 316 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.484 | 254 | 309 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.2E-13 | 255 | 308 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.75E-11 | 256 | 306 | No hit | No description |
CDD | cd14702 | 3.93E-7 | 257 | 308 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 259 | 274 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 9.1E-41 | 323 | 440 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 466 aa Download sequence Send to blast |
MERVFSVDEI ADSFWAASPP GHGLPPPVAT DGGPRGAMSR SPSEWYFEKF LEVAEEATVP 60 STTSPAPPNP NPNPNSNPNL NPSPPPASVV ASNFYGGGRK DEGRGDDDEV IQIKAPAIVP 120 ATVALHRGPP SDPPMDVDPE EYAVLLKKRL DMYCAAVAMS RSSGVNPQDS SASTDIKSQF 180 LDASELGSQA PATGNGSMVQ QKAGSGPSGG PVPTVMQNLG VQARPTTSGS SREQSDDEEL 240 EGEVETTENM DPADAKRARR MISNRESARR SRRRKQAHLN ELEAQVSQLR VENSSLLKSL 300 TDVNQKYNEA AVDNRILKAD VETLRAKVKM AEDTVKRVTG ISPMYPNIPD ISTISMSFSG 360 SPSDATSSVV VPIQDDPNHF FQQPPPHDQR INTCLPEIAP APPVEHVVHG AVPGDKISST 420 TSIQQVAGLE HLQQRICRGQ SPCGSVQWDA AAPDPEASVN SKQNQV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 268 | 275 | RRSRRRKQ |
2 | 270 | 275 | SRRRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010936039.1 | 0.0 | light-inducible protein CPRF2 isoform X1 | ||||
TrEMBL | A0A2H3XMQ9 | 0.0 | A0A2H3XMQ9_PHODC; bZIP transcription factor RISBZ2-like isoform X1 | ||||
STRING | XP_008786076.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3488 | 38 | 78 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.2 | 6e-53 | bZIP family protein |