PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010935742.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family TALE
Protein Properties Length: 735aa    MW: 79751.1 Da    PI: 6.8561
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010935742.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.13.5e-095575892254
                     SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     ++yp+ +++  LA+++gL+ +qV++WF N R +
  XP_010935742.1 557 HPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 589
                     89*****************************88 PP

2BELL111.83.8e-36408478272
            BELL   2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     r e+q+kkakLl +l eV++rYkqy++q+q+v+s+F+ vagl sa+pYtslAlk +S+hFrc+k+ai++q+
  XP_010935742.1 408 RPEMQQKKAKLLYMLGEVCRRYKQYHQQMQMVVSAFDSVAGLSSATPYTSLALKSVSKHFRCIKNAISDQL 478
                     669*****************************************************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005744.6E-50322476IPR006563POX domain
PfamPF075268.4E-45327475IPR006563POX domain
PROSITE profilePS5007111.742530593IPR001356Homeobox domain
SMARTSM003896.1E-9533597IPR001356Homeobox domain
CDDcd000868.30E-12533594No hitNo description
SuperFamilySSF466898.55E-17535600IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.6E-27536597IPR009057Homeodomain-like
PfamPF059204.3E-18550589IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 735 aa     Download sequence    Send to blast
MQDSQNWLLG MNSFRPESEA HVAQQSRRDK LRVQHIDPIP DLVQVRDVYD PALFSSSAHI  60
HNLPLGGAET SITNPSPSSF QETPGHLARA SDPRGPCVWR AQQPSCDWIV ASPAPMTNSL  120
ASPGASHFKP GFSSYPDAST ELSSQENHEQ QCGDLHFPSS QFHHPALQDV VTSVGDHGLE  180
LPSVREPGQP GSWVDSGNEL LLLPSFAEQP NTVWVSRQPP QWNGEGGFTR GKVEEGFTTV  240
GSEGGAQGLS LTLSSNPASE LHVAQLEERF GLPSSRASGA GQSCPYPRFS MGDRGYGGSL  300
QGMVSSPVAE TRRAVGPLGP FTGYATILKS SRFLKPAQQL LDEFCSAVKQ CHVGGSSCGV  360
SSANCDGVVA GEKENSARGG SSAVSSSSTF HGSSTEAAVG GEAAQIHRPE MQQKKAKLLY  420
MLGEVCRRYK QYHQQMQMVV SAFDSVAGLS SATPYTSLAL KSVSKHFRCI KNAISDQLQH  480
ISKVLGEEFI KSPCSSRGET TMTPKLKYVD QSLRKQKAGE NSLGFVDQNQ PVWRPQRGLP  540
ERAVAVLRAW LFDHFLHPYP TDTDKHMLAT QTGLSRNQVS NWFINARVRL WKPMVEEIHM  600
LETKGMNGMD LNSGNRNGGT KPPIADAGRP SNGQMAEGQC NKPLDCSSME PVLNDGGTQS  660
TEPWHCEKRS RMDECGIPTS MDGNLISFGT YHSAMDVGGL GAVSLTLGLR HEDGQQQQQQ  720
QMRHFGSQML HDFVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A2e-15539596158Homeobox protein Meis1
4xrs_B2e-15539596158Homeobox protein Meis1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010935741.10.0BEL1-like homeodomain protein 8
RefseqXP_010935742.10.0BEL1-like homeodomain protein 8
TrEMBLA0A2H3XQS50.0A0A2H3XQS5_PHODC; BEL1-like homeodomain protein 9
STRINGXP_008787379.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27990.15e-87BEL1-like homeodomain 8