PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010935352.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 196aa    MW: 21598.3 Da    PI: 6.5005
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010935352.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.31e-30121178158
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                     ldDg++WrKYG+K+vk+s++pr+YYrC+s+gC+vkk+ver+ +d ++v++tYeg Hnh
  XP_010935352.1 121 LDDGFKWRKYGKKSVKNSPNPRNYYRCSSEGCSVKKRVERDPQDSDYVITTYEGVHNH 178
                     59******************************************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-31110180IPR003657WRKY domain
SuperFamilySSF1182901.06E-26115179IPR003657WRKY domain
PROSITE profilePS5081130.802116181IPR003657WRKY domain
SMARTSM007741.6E-34121180IPR003657WRKY domain
PfamPF031063.5E-24122178IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MAALTELSDT TMLHSSLLPS NDSTSHACCD FFSANSFSQP VLECSDHIAF INEGLFQGLQ  60
LPTRIAAEEL VHAIAPVDVS GESSEDSTTN KAMLCVGEMK RMKPDARCRI GFRMKSAVEI  120
LDDGFKWRKY GKKSVKNSPN PRNYYRCSSE GCSVKKRVER DPQDSDYVIT TYEGVHNHIS  180
PVRTGAAITD AIPSTN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-24109181274WRKY transcription factor 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010935281.11e-135probable WRKY transcription factor 51
TrEMBLA0A2H3ZDW66e-96A0A2H3ZDW6_PHODC; probable WRKY transcription factor 51
STRINGXP_008812299.11e-96(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.11e-39WRKY DNA-binding protein 51