PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010935230.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

NAC

Protein Properties

Length: 276aa MW: 31630.9 Da PI: 6.545

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010935230.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	157.8	4.6e-49	21	147	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+eel+++yL++ v+gkkl++ ++i ++++y+++Pw+Lp ++ +e+ewyfF++rd+k+++g r+nr+t++g+Wkatg+d+++ s XP_010935230.1 21 PGFRFHPTEEELLDFYLRRAVQGKKLQI-DIIGTLNLYRHDPWELPGLARIGEREWYFFVPRDRKQSNGGRPNRTTEHGFWKATGSDRPIRSVad 114 9*************************.99***********8778899*********************************99876 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++l+glkktLv+y+grap+g+ktdWvm+eyrl XP_010935230.1 115 PKRLIGLKKTLVYYEGRAPRGSKTDWVMNEYRL 147 7788*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.31E-57	19	166	IPR003441	NAC domain
PROSITE profile	PS51005	55.516	19	166	IPR003441	NAC domain
Pfam	PF02365	3.0E-25	21	147	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence Send to blast
MSTEGRESNS MEQSGAGLEL PGFRFHPTEE ELLDFYLRRA VQGKKLQIDI IGTLNLYRHD 60 PWELPGLARI GEREWYFFVP RDRKQSNGGR PNRTTEHGFW KATGSDRPIR SVADPKRLIG 120 LKKTLVYYEG RAPRGSKTDW VMNEYRLPDP TTPPTADIVL CKIYRKATSL KELEQRAAMA 180 SPNSKLIVDS VLSSDQESLQ KWMVVDDDGG VKEAKEEVGK ETEVEIFAES ARSINLPKLE 240 VPKYNGLEWM QDPFLTQLRS PWMDPWSPYH ASVLNF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	1e-49	21	166	17	168	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010935230.2	0.0	NAC domain-containing protein 22
Swissprot	Q10S65	1e-103	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A3Q0HMW9	1e-157	A0A3Q0HMW9_PHODC; NAC domain-containing protein 22-like
STRING	XP_008781351.1	1e-157	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1770	38	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	6e-92	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]