PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010934930.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family TALE
Protein Properties Length: 575aa    MW: 63928.5 Da    PI: 7.9069
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010934930.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.51.1e-083543911954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yp+  ++  LA+++gL+ +qV++WF N R +
  XP_010934930.1 354 FEHflHPYPNDVDKHILARQTGLSRSQVSNWFINARVR 391
                     664459******************************88 PP
2BELL1101.4e-35218286472
            BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     elq++kakLl +leeVd+rY++y++q+++v+ssFeava  g+a++Y +lA+ka+SrhFrcL+d i++qi
  XP_010934930.1 218 ELQRRKAKLLAMLEEVDRRYRKYCDQMRAVVSSFEAVAREGAATVYSTLASKAMSRHFRCLRDGIVGQI 286
                     89*****************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005743.6E-58156284IPR006563POX domain
PfamPF075266.6E-47158282IPR006563POX domain
PROSITE profilePS5007111.904332395IPR001356Homeobox domain
CDDcd000869.34E-11335396No hitNo description
SMARTSM003893.1E-8335399IPR001356Homeobox domain
SuperFamilySSF466898.55E-17336401IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.1E-27338401IPR009057Homeodomain-like
PfamPF059202.8E-17352391IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0009506Cellular Componentplasmodesma
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 575 aa     Download sequence    Send to blast
MMAHESHYAG FSSAGHPAMQ SFESNQELFG LQGGMEMLGA TSKHQTSNLW RGFMPRDFPE  60
ASSKNLMVTT EMVASASPWQ VDDSSLRSLF PCEETEQSNR GLSLSLFNPK NSDAIGVPQA  120
CYQSDSRDVL LSRAASSHQQ QVFMQEGRGF NPQQPFQLKN SKYLGPAKEL LNEFCNLGAE  180
ISSKKRSQKA SQWEEGGPSS SSSSWNRNQP LNSMDLLELQ RRKAKLLAML EEVDRRYRKY  240
CDQMRAVVSS FEAVAREGAA TVYSTLASKA MSRHFRCLRD GIVGQIRATR KAIGEKDTVA  300
PGTTRGETPR LKLVDQCIRQ QKAFQQAGML DGHPWRPQRG LPERSVSILR AWLFEHFLHP  360
YPNDVDKHIL ARQTGLSRSQ VSNWFINARV RLWKPMVEDM YLEEVKEQNS QSSNATTTGQ  420
QDNTNRKPNP DPVLDQKPAP VQLLNDSDSL SSIINSSHQS DPKNTANARA SQHHTQQHQV  480
PRAESFGVAS LDFPYGSCGS QNLGGGVSLT LGLQQHSGGG MSLSFSPASQ HSLLFSREHI  540
DDDGQQVQFT ILDGEAQTLP YRNMMGAQLL HDLAG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A6e-15341398562Homeobox protein Meis2
3k2a_B6e-15341398562Homeobox protein Meis2
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPlays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269|PubMed:12244239, ECO:0000269|PubMed:17693535, ECO:0000269|PubMed:22786869}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010934930.10.0homeobox protein BEL1 homolog
SwissprotQ388971e-123BEL1_ARATH; Homeobox protein BEL1 homolog
TrEMBLA0A2H3YCZ20.0A0A2H3YCZ2_PHODC; homeobox protein BEL1 homolog
STRINGXP_008796900.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63983547
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.11e-120TALE family protein
Publications ? help Back to Top
  1. Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS
    CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules.
    Development, 2016. 143(3): p. 422-6
    [PMID:26700684]
  2. Lozano-Sotomayor P, et al.
    Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana.
    Plant J., 2016. 88(3): p. 437-451
    [PMID:27402171]