PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010934629.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 517aa    MW: 55280.2 Da    PI: 7.8502
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010934629.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.49.7e-31192251159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK+ kg+++pr+YYrCt a  Cpv+k+v+r+aed +++++tYeg+Hnh+
  XP_010934629.1 192 MNDGCQWRKYGQKVAKGNPCPRAYYRCTVApACPVRKQVQRCAEDMSILITTYEGNHNHP 251
                     58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.2E-32178253IPR003657WRKY domain
SuperFamilySSF1182903.01E-27185253IPR003657WRKY domain
PROSITE profilePS5081128.667187253IPR003657WRKY domain
SMARTSM007744.1E-37192252IPR003657WRKY domain
PfamPF031061.2E-26193251IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    Send to blast
MDASSRPSSS KPKNSVTISQ ETQPESTKAE RFDVKKPFMA QTVKDYQSPQ MHFFDIVQKE  60
HVKKPDETSS TLDNAEEPEL VSLSLGTRAS RSGKEEEANT YSKGKEDGMI KEGLTLGLHS  120
KVDGSSSGPS EALLNLSPDN SFEEPKEADT GEPWPPSKMM KSSANGEDEV LPQPPLKRAR  180
VSVRARCDAP TMNDGCQWRK YGQKVAKGNP CPRAYYRCTV APACPVRKQV QRCAEDMSIL  240
ITTYEGNHNH PLPMGATAMA STTSAAASML ISGSSTSSCP PFGSLASSTA NLHGFSQVDN  300
SRFKQFYPPN PSIYSSASHP TITLDLTVPS STPQYKFSSN LTYPKYSSTS LNFSSSKSNT  360
IPTSWSGGSS TYGAHFYDKN SMGSLNLGGQ TQDSFNLSYM HKGTSQNPAP SQHLLTETVA  420
NAITSHPSFQ SALATAITSY LGAQGAERAG EGSPAGQVGL KWSEQLALAP TYTSAFTSPS  480
NYSSHHQGSS TFLQPPPALL SAKSASASPV GNGEQKS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A9e-221922531777Probable WRKY transcription factor 4
2lex_A9e-221922531777Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010934629.20.0probable WRKY transcription factor 72
TrEMBLA0A2H3ZHB40.0A0A2H3ZHB4_PHODC; probable WRKY transcription factor 72
STRINGXP_008813530.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50473862
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.17e-76WRKY DNA-binding protein 72