PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010934548.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 266aa    MW: 29197.3 Da    PI: 8.4987
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010934548.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.4e-192372255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d s   +r r +lg+f+t+eeAa+a+++a+++l+g
  XP_010934548.1 23 RFVGVRQRP-SGRWVAEIKDSS---QRLRLWLGTFDTPEEAARAYDEAARALRG 72
                    589******.7*********43...36*************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.062380IPR001471AP2/ERF domain
CDDcd000186.21E-302379No hitNo description
Gene3DG3DSA:3.30.730.103.6E-282380IPR001471AP2/ERF domain
SMARTSM003806.3E-352386IPR001471AP2/ERF domain
PfamPF008475.6E-142372IPR001471AP2/ERF domain
PRINTSPR003671.6E-72435IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-192480IPR016177DNA-binding domain
PRINTSPR003671.6E-74662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MAGTESPKAT TPEQPPKSSS GRRFVGVRQR PSGRWVAEIK DSSQRLRLWL GTFDTPEEAA  60
RAYDEAARAL RGDNARTNFV TDPNSPPMDF SSPNAPFFLD SDVQHGGGFS SLKARLSKNL  120
QNIMARTADN NRSSKTRVSD QSTFASIFHF RSNNFEHYLM DSKSIENSVQ PSFVVPRRAE  180
EKSAWGASSE CIGLGPHATS SWDGLTDACD VGIPQRGFND QMVWGIDGGE VASRRERELA  240
CSKRFKVSSS IIVPPTFSAS QSLGEN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1423841476Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010934548.10.0dehydration-responsive element-binding protein 2D-like
TrEMBLA0A426ZA358e-84A0A426ZA35_ENSVE; Uncharacterized protein
STRINGXP_008809070.11e-156(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124292634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.17e-18related to AP2 11