PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010934547.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 266aa    MW: 29118.3 Da    PI: 8.987
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010934547.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59e-202373256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    ++ GVr+++ +grWvAeI+d s   +r r +lg+f+t+eeAa+a+++a+++l+ge
  XP_010934547.1 23 RFVGVRQRP-SGRWVAEIKDSS---QRLRLWLGTFDTPEEAARAYDEAARALRGE 73
                    589******.7*********43...36**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.89E-302379No hitNo description
SMARTSM003801.9E-352386IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.0E-282380IPR001471AP2/ERF domain
PfamPF008472.4E-142373IPR001471AP2/ERF domain
PROSITE profilePS5103220.1522380IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-202480IPR016177DNA-binding domain
PRINTSPR003671.6E-72435IPR001471AP2/ERF domain
PRINTSPR003671.6E-74662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MAGTENSKVT IPKQPPKSSS GRRFVGVRQR PSGRWVAEIK DSSQRLRLWL GTFDTPEEAA  60
RAYDEAARAL RGENARTNFV TDPNSPPMDF SSANAPFFLD SDVRRGGGFS SLRARLSKNL  120
QNIMARTADN NRSSKTRVSD QSTFASIFHC RSNNFQHYLM DSKSIENSVQ PSFVVPRPAE  180
EQSAWGASSE CIGLGPHATS SWDGLRDACD VGIPQHGFND PMVWGIDGGE VASRGERELA  240
CSKRFKVSSS IIVPPTFSAS QSLGEN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1423841476Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010934547.10.0dehydration-responsive element-binding protein 1E
TrEMBLA0A426ZA357e-84A0A426ZA35_ENSVE; Uncharacterized protein
STRINGXP_008809070.11e-160(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124292634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-18related to AP2 11