PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010933605.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 279aa    MW: 30194.2 Da    PI: 5.5043
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010933605.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.35e-20121171255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp   + +  r++lg+f+ta eAaka+++a+ +++g
  XP_010933605.1 121 RYRGVRQRP-WGKFAAEIRDP---NrRGSRIWLGTFDTALEAAKAYDRAAFQMRG 171
                     7********.**********9...4334*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.4E-14121171IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-32121180IPR001471AP2/ERF domain
CDDcd000183.79E-29121180No hitNo description
SMARTSM003801.6E-38121185IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-22121180IPR016177DNA-binding domain
PROSITE profilePS5103224.171121179IPR001471AP2/ERF domain
PRINTSPR003671.3E-13122133IPR001471AP2/ERF domain
PRINTSPR003671.3E-13161181IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MASIGDGDST LDLIRELLLG DLPLSPLPPP SAPNDIAVSD YIDTTQPFAG SSGRIDPGGL  60
ESYRFSEPVA PMIRFGGDSP QASDLRGPSF TISLPPVRKF EIEWTEVGAA VGPAEYDDGR  120
RYRGVRQRPW GKFAAEIRDP NRRGSRIWLG TFDTALEAAK AYDRAAFQMR GSKAILNFPN  180
EVGSSGQWMP PPPAPLAAAG KRKRAAAAAG EAREDVMRPI KKERSPEMEG SREENIPSVC  240
PLTPSSVWDG ADMMGIFNVP PLSPLSPHPP FGFPKLIVR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-28119184368ATERF1
3gcc_A2e-28119184368ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010933605.10.0ethylene-responsive transcription factor ERF105
TrEMBLA0A2H3XNJ51e-128A0A2H3XNJ5_PHODC; ethylene-responsive transcription factor ERF105-like
STRINGXP_008786269.11e-129(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.16e-38ethylene responsive element binding factor 5