PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010933535.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family STAT
Protein Properties Length: 720aa    MW: 80875.9 Da    PI: 6.0539
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010933535.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT190.42e-592343531119
            STAT   1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkk 94 
                     ldvvllna+g++v+k++e+vasL+yad+g++vek+ ddaeapLL+sydG+e++s+drp+ llrG+a+fklkisqLssk+dnrLfr++f++++ ++
  XP_010933535.1 234 LDVVLLNAFGRTVNKEMEIVASLVYADNGTPVEKTrDDAEAPLLTSYDGLEHPSTDRPVTLLRGCATFKLKISQLSSKSDNRLFRVCFRTMHAQR 328
                     8**********************************9*********************************************************** PP

            STAT  95 ypfleavskpirCisrsrntrsssl 119
                     ypflea+s+pi+Cisr+r++r+++l
  XP_010933535.1 329 YPFLEAYSHPIHCISRNRSNRPLAL 353
                     *********************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF498991.36E-737173IPR013320Concanavalin A-like lectin/glucanase domain
Gene3DG3DSA:2.60.120.2002.9E-439161IPR013320Concanavalin A-like lectin/glucanase domain
PfamPF133855.0E-739154No hitNo description
SuperFamilySSF555501.48E-8618698IPR000980SH2 domain
Gene3DG3DSA:3.30.505.101.6E-6619685IPR000980SH2 domain
PROSITE profilePS500019.93622685IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 720 aa     Download sequence    Send to blast
MADEQWREED YSQLRDLRVS LDQVGEDGEG RGDGGGDGGS GFSLCLWLYL SSSARPSSMI  60
LRQMTSENEG EVPFLALSEQ NKLMLFPLMF LHKEAPSTGS SFTWTDMPHI SSKIEFPLEK  120
WVHVGCEVAT HHMRLHIDGK LVGEEPVTLL TNKHHYRDNF KRINFVGNDG KLDGYVYHAQ  180
VLPISASITD QFVKDPPVKL SLDSSGISDG VEECGDGVWS IVGGKASCRR NFSLDVVLLN  240
AFGRTVNKEM EIVASLVYAD NGTPVEKTRD DAEAPLLTSY DGLEHPSTDR PVTLLRGCAT  300
FKLKISQLSS KSDNRLFRVC FRTMHAQRYP FLEAYSHPIH CISRNRSNRP LALGKRLAST  360
RVLLDEIQSL KGNDGSRVIH DTYGDDRFRI PNQSVLRCNT PSKHSKLEHD SSPSAIDANG  420
ILEKDEMSLK TSLEVRSNNF EGTDSAPSDS ESTDARNYES RWTKEAMNPI SDAIMFKYCL  480
EGTNERLMLL KEMITSACDE DITNFAEQVS LYAGCSHHQY QILISKRLLQ EGADTWNSIT  540
QNNCHVLWKD AVPEIDKRFR NTAHSNRGLS GEDLEVLRGI AGCGDHLGRE EFDRMWYWLY  600
PVAFSLSNEQ INTMWACISP KWIEGLITRE EAENALKGPR GLQRPGTFVL RFPTSRSWPH  660
PDAGSLVVTY VAADSTLHHK LLSFDYRKKD TSPLQELLLE EPELSHLGRV SRQGHAASQS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010933535.10.0SH2 domain-containing protein A isoform X1
TrEMBLA0A2H3XNE80.0A0A2H3XNE8_PHODC; LOW QUALITY PROTEIN: SH2 domain-containing protein B-like
STRINGXP_008786220.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75473135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.11e-179SH2 domain protein B