PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010932680.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | TALE | ||||||||
Protein Properties | Length: 671aa MW: 73974.3 Da PI: 6.6769 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 27.3 | 6.2e-09 | 432 | 469 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt +q+++WF N R + XP_010932680.1 432 FEHflHPYPKDSEKLMLARQTGLTRSQISNWFINARVR 469 664459******************************88 PP | |||||||
2 | BELL | 122.9 | 1.3e-39 | 295 | 366 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erq+lq+k +kLl +l+eVd+rYkqy++q+q+v+ssF+ vag+gsakpYt+lAlk+iSr+FrcL+dai qi XP_010932680.1 295 ERQDLQNKMTKLLAMLDEVDRRYKQYYHQMQIVVSSFDGVAGCGSAKPYTALALKTISRQFRCLRDAINCQI 366 799*****************************************************************9997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 5.0E-58 | 216 | 364 | IPR006563 | POX domain |
Pfam | PF07526 | 4.1E-49 | 222 | 362 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.179 | 410 | 473 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.32E-12 | 413 | 474 | No hit | No description |
SMART | SM00389 | 1.3E-9 | 413 | 477 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 2.57E-17 | 414 | 480 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 5.1E-28 | 416 | 479 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 1.1E-17 | 430 | 469 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 671 aa Download sequence Send to blast |
MASFYSSSTN QMDVMPTFYT RDPGHGSYPE SSTTSHMMYP QYSSSVPYSG KLTGNNQSQQ 60 NCIDPPVPAS MISQDSSTGG ADFASHLGER PYNALRDGRN EVLFMQTIGR SLNEGSDLVH 120 GSVADDPHMS LHTPLGILNG HNLSLQQSNI STAQRQALSL SLSTQIPVPS FQFQPSNSDI 180 SILSSHQSNL GDGRAFRDDI YRNKLMHSNA SPYDISSITS TIPNSRYLKA AQQLLDEVVN 240 VQKALNQKTG KTQSLDNSAG ATDTKNNNAV SKADGMSLNP QGSNDQSPTE LLPSERQDLQ 300 NKMTKLLAML DEVDRRYKQY YHQMQIVVSS FDGVAGCGSA KPYTALALKT ISRQFRCLRD 360 AINCQIQATK KNLGEKDSSN SKGGGISRLK YIDQQLRQQR AMQQLGMVQH NAWRPQRGLP 420 ETSVSVLRAW LFEHFLHPYP KDSEKLMLAR QTGLTRSQIS NWFINARVRL WKPMIEEMYR 480 EEIGEAEMDS NSSLENIPKS KDETGSSEER ERSKSPATER CHTSQLNESS KSNISDMDVG 540 GTAAGFPNEA NADDTFMNLM LKDRRHDGGD CGLLHDAIAQ KSDGGRRLVA YPMAELGRYG 600 HGGVSLTLGL QHCDGGLPVS NSQQSFPGVR GQDVYTAAPP LEADAADYDC INLMDQRHRF 660 GPSPLLHDFV A |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4xrs_A | 1e-16 | 419 | 476 | 1 | 58 | Homeobox protein Meis1 |
4xrs_B | 1e-16 | 419 | 476 | 1 | 58 | Homeobox protein Meis1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010932672.1 | 0.0 | BEL1-like homeodomain protein 7 | ||||
Refseq | XP_010932680.1 | 0.0 | BEL1-like homeodomain protein 7 | ||||
Refseq | XP_029123261.1 | 0.0 | BEL1-like homeodomain protein 7 | ||||
TrEMBL | A0A2H3Y661 | 0.0 | A0A2H3Y661_PHODC; BEL1-like homeodomain protein 7 isoform X2 | ||||
STRING | XP_008794014.1 | 0.0 | (Phoenix dactylifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16400.1 | 1e-117 | BEL1-like homeodomain 7 |