PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010932549.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NF-X1
Protein Properties Length: 1105aa    MW: 118139 Da    PI: 8.0416
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010932549.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X121.55.2e-07293311119
        zf-NF-X1   1 CGkHkCqklCHeGpCppCp 19 
                     CG+H+C + CH+G C pC+
  XP_010932549.1 293 CGRHRCDRVCHTGACSPCR 311
                     ******************6 PP
2zf-NF-X1186.5e-06415432118
        zf-NF-X1   1 CGkHkCqklCHeGpCppC 18 
                     CG H+C++ CHeG CppC
  XP_010932549.1 415 CGLHRCKENCHEGFCPPC 432
                     ****************** PP
3zf-NF-X118.44.6e-06512530119
        zf-NF-X1   1 CGkHkCqklCHeGpCppCp 19 
                     CG+H+Cq lCH G CppC 
  XP_010932549.1 512 CGQHSCQLLCHSGHCPPCL 530
                     ******************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF578502.03E-5116154No hitNo description
PROSITE patternPS013590120181IPR019786Zinc finger, PHD-type, conserved site
CDDcd060081.70E-5215276No hitNo description
SMARTSM004380.023238256IPR000967Zinc finger, NF-X1-type
PfamPF014228.3240255IPR000967Zinc finger, NF-X1-type
CDDcd060087.44E-11283330No hitNo description
SMARTSM004380.0018293312IPR000967Zinc finger, NF-X1-type
PfamPF014221.3E-5293311IPR000967Zinc finger, NF-X1-type
CDDcd060084.56E-10347390No hitNo description
SMARTSM004380.0014357376IPR000967Zinc finger, NF-X1-type
PfamPF014220.039357374IPR000967Zinc finger, NF-X1-type
CDDcd060082.49E-12405453No hitNo description
SMARTSM004380.0013415434IPR000967Zinc finger, NF-X1-type
PfamPF014228.5E-5415432IPR000967Zinc finger, NF-X1-type
SMARTSM00438200473491IPR000967Zinc finger, NF-X1-type
PfamPF0142218473484IPR000967Zinc finger, NF-X1-type
CDDcd060089.42E-10502554No hitNo description
SMARTSM004381.1E-4512531IPR000967Zinc finger, NF-X1-type
PfamPF014221.4E-4512529IPR000967Zinc finger, NF-X1-type
SMARTSM004380.0061569587IPR000967Zinc finger, NF-X1-type
PfamPF014223.2569586IPR000967Zinc finger, NF-X1-type
SMARTSM004380.047622656IPR000967Zinc finger, NF-X1-type
PfamPF014220.0069622637IPR000967Zinc finger, NF-X1-type
CDDcd060081.15E-5654705No hitNo description
PfamPF0142278658684IPR000967Zinc finger, NF-X1-type
SMARTSM004380.2665686IPR000967Zinc finger, NF-X1-type
PfamPF014244.8E-6797862IPR001374R3H domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003676Molecular Functionnucleic acid binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 1105 aa     Download sequence    Send to blast
MQPASFESSR PRNDRRTGAG GGPRPHHRAS AGGSRQEWVP RVSAPAASIH QPPSSGGDST  60
NVPGPNLGHH RHRNHHPARP AFVPRPAPPA AAPQDGVDRA AVPQLVQEIQ DKLAKGGVEC  120
MICYDMVRRS APIWSCSSCF AIFHLPCIRK WARSPTSADT SAPTAAAAPD GGGGGWRCPG  180
CQSVQATPAK DLTYTCFCGR RRDPPNDFYL TPHSCGESCG KPLDKTPPSS TEDDDSRCPH  240
VCVLQCHPGP CPPCKAFAPR RPCPCGKKTI VRRCSDRSTP LTCGQLCNRL LSCGRHRCDR  300
VCHTGACSPC RFLISASCFC KKKTEVVICG NMAVKGDLLE MDGLFSCDSI CGRTLSCGNH  360
HCSENCHPGP CGECELLPGK IKTCRCGKTE LKEERESCLD PIPTCPEICE KLLICGLHRC  420
KENCHEGFCP PCLVQVDQKC RCGSSSRTVD CYKVSSEREK FACDKPCGRK KNCGRHRCSE  480
RCCPLSKPSA QLSGDDWDPH LCSMPCGKKL RCGQHSCQLL CHSGHCPPCL ETIFTDLTCA  540
CGKTSIPPPL PCGTPVPSCP HPCLFPQPCG HSASHTCHFG DCPPCSVPMA KECIGGHVLL  600
RNIPCGSKDI RCNQLCGKTR QCGLHACART CHPAPCDTSG GSGSGSVSGL KASCGQVCGA  660
PRRDCKHTCT APCHPLAPCP DLRCEFPVTI TCSCGRLTAG VPCGAGGSTS GFNVDPVIEA  720
SIIQKLPVPL QPVEANGKKV PLGQRKLTCD EDCAKLERKR VLAEAFDITP PNLDALHFGE  780
NATASDLLAD LFRREPKWVL AVEERLKFMV LGKARGGASS GLRVHVFSHM VKEKRDAVRQ  840
LAERWKLSVQ AAGWEPKRFL VVHVTPKSRS PARILGSKPG IPVTASHPLA YDPLIDMDPR  900
LVVAMLDLPR DADISALVLR FGGECELVWL NDKNALAVFG DPARAATALR RLDHGSPYQG  960
AVVVLHNAGA SGPSASNAWG MGLREGGVTA KSSNPWNKAL ALESDSWGRD WSGRPDAAVP  1020
VPVWRGNAAA PISASSNRWS VLNSDMGMNL VSSDSVEDRG SVPGLEGGVV MDSRAAGGLS  1080
SVGQGNGVAN VEMPEEVEDW EEAYE
Functional Description ? help Back to Top
Source Description
UniProtMediates E2-dependent ubiquitination (By similarity). Confers resistance to osmotic stress such as high salinity. Promotes H(2)O(2) production. Negative regulator of some defense-related genes via an salicylic acid (SA)-dependent signaling pathway. Confers susceptibility to the compatible phytopathogen Pseudomonas syringae pv. tomato strain DC3000 (Pst DC3000). Mediates resistance to type A trichothecenes (phytotoxins produced by phytopathogenic fungi). {ECO:0000250, ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By brassinosteroids, osmotic stress and high salinity. Accumulates in response to SA, ethylene, methyl jasmonate (MeJA), flagellin (e.g. flg22), and type A trichothecenes such as T-2 toxin and diacetoxyscirpenol (DAS), but not in response to type B trichothecenes such as deoxynivalenol (DON). {ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010932549.10.0NF-X1-type zinc finger protein NFXL1
SwissprotQ9SY590.0NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
TrEMBLA0A2H3XV920.0A0A2H3XV92_PHODC; NF-X1-type zinc finger protein NFXL1
STRINGXP_008789280.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61303543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10170.10.0NF-X-like 1