PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010932043.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | ERF | ||||||||
Protein Properties | Length: 157aa MW: 17293.4 Da PI: 9.4949 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.2 | 1.5e-16 | 24 | 73 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr +k +g+WvAe+r+p++ r r++lg++ t+ Aa+a++ a +l+g XP_010932043.1 24 PYRGVRMRK-WGKWVAEVREPRK---RSRIWLGSYSTPVAAARAYDTAVFYLRG 73 59*****99.*******999854...5*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 22.642 | 24 | 81 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 7.2E-30 | 24 | 82 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.2E-36 | 24 | 87 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 7.82E-26 | 25 | 82 | No hit | No description |
Pfam | PF00847 | 1.1E-10 | 25 | 73 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.9E-21 | 25 | 82 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 3.3E-12 | 25 | 36 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.3E-12 | 63 | 83 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0042538 | Biological Process | hyperosmotic salinity response | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0001078 | Molecular Function | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence Send to blast |
MEGGCCSTSE ETRKPAAGAV KERPYRGVRM RKWGKWVAEV REPRKRSRIW LGSYSTPVAA 60 ARAYDTAVFY LRGRSARLNF PEELAAEEDC EAATAAAGGM SAASIRKKAT EVGARVDALQ 120 TSLLSQPQQQ QQQSRSPRAP KYPDLNQEPS PESSDMD |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 2e-16 | 25 | 84 | 15 | 75 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010932041.1 | 1e-111 | ethylene-responsive transcription factor ERF011 isoform X1 | ||||
Refseq | XP_019708843.1 | 1e-111 | ethylene-responsive transcription factor ERF011 isoform X1 | ||||
Refseq | XP_029122770.1 | 1e-111 | ethylene-responsive transcription factor ERF011 isoform X2 | ||||
Swissprot | Q9SNE1 | 5e-47 | ERF11_ARATH; Ethylene-responsive transcription factor ERF011 | ||||
TrEMBL | A0A3Q0HQQ5 | 9e-81 | A0A3Q0HQQ5_PHODC; ethylene-responsive transcription factor ERF011-like | ||||
STRING | XP_008776525.1 | 2e-81 | (Phoenix dactylifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67190.1 | 2e-40 | DREB and EAR motif protein 2 |
Publications ? help Back to Top | |||
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