PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010926496.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | G2-like | ||||||||
Protein Properties | Length: 231aa MW: 25782.1 Da PI: 5.6836 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 84.3 | 1.3e-26 | 177 | 227 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k+r++W+peLH rF+++++qLGGs+ AtPk+i+elmkv+gLt+++vkSHLQ XP_010926496.1 177 KARRCWSPELHCRFLHVLDQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQ 227 68************************************************* PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 10.863 | 174 | 231 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.79E-12 | 175 | 227 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 7.9E-22 | 176 | 227 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.8E-21 | 177 | 227 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence Send to blast |
MDFAERARRY QEYVEALEEE RRKIEVFQRE LPLCLQLVTQ AIEGIRIQIG SSEEMVTDGP 60 VLEEFIPLKP TSSSIEEEKG GLMEIEQERS EKKPDWLRSV QLWNQETDHS LPKGEPPKKP 120 IAVNAKKSSG AFHPFEREKH VPAVPAGAAA SSSTVGGGGG GGEKEKDKEG QSQPPRKARR 180 CWSPELHCRF LHVLDQLGGS HAATPKQIRE LMKVDGLTND EVKSHLQDDV A |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010926495.1 | 1e-166 | transcription factor NIGT1 | ||||
Swissprot | Q9FPE8 | 6e-72 | HHO3_ARATH; Transcription factor HHO3 | ||||
TrEMBL | A0A2H3XDY4 | 1e-128 | A0A2H3XDY4_PHODC; transcription factor NIGT1 | ||||
STRING | XP_008782297.1 | 1e-128 | (Phoenix dactylifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25550.1 | 2e-69 | G2-like family protein |
Publications ? help Back to Top | |||
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