PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010926202.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 280aa    MW: 31701.5 Da    PI: 4.7814
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010926202.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.71.1e-1694142254
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     +ykGVr+++ +g+W+AeI+dp    +r  r +lg+++taeeAa a+ aa  ++ 
  XP_010926202.1  94 KYKGVRQRR-WGKWAAEIKDP----IRgVRRWLGTYDTAEEAADAYQAAVSRML 142
                     8*****998.**********7....246********************998886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.5E-2293146IPR001471AP2/ERF domain
SuperFamilySSF541711.9E-1694144IPR016177DNA-binding domain
PfamPF008473.6E-1194142IPR001471AP2/ERF domain
PROSITE profilePS5103219.40194151IPR001471AP2/ERF domain
CDDcd000181.47E-2394141No hitNo description
SMARTSM003802.8E-2294157IPR001471AP2/ERF domain
PRINTSPR003672.8E-995106IPR001471AP2/ERF domain
PRINTSPR003672.8E-9117133IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MVIAKEKKIT DKSNHLQPES FRRKIRLIFN DADATDSSSE EEEDRGMMRK SNKRIIHEIL  60
ISPSRSFSTF FTPVSKTRKI QTLKSMDSST GTRKYKGVRQ RRWGKWAAEI KDPIRGVRRW  120
LGTYDTAEEA ADAYQAAVSR MLEEKQQLLR PSISPTSSAS EISEVTFSAP SPSAPSPSSV  180
LDLSVAEVNV AVEEVMHTNN SISHGADVVD AMEEEFFEHR QLVKPEFDFR PEFDFGLDSD  240
VFLFGSLSGE FLGLNDLPWE PSFEDLDCSF LESPMENVVF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010926202.20.0pathogenesis-related genes transcriptional activator PTI6-like
TrEMBLA0A2H3YTA22e-74A0A2H3YTA2_PHODC; ethylene-responsive transcription factor CRF1-like
STRINGXP_008803555.14e-75(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50203763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.21e-11cytokinin response factor 2