PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010926195.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 546aa    MW: 58847.8 Da    PI: 8.1431
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010926195.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.31e-30288346259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  XP_010926195.1 288 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVQRCAEDRSILITTYEGNHNHP 346
                     7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.0E-33272348IPR003657WRKY domain
SuperFamilySSF1182906.15E-28280348IPR003657WRKY domain
PROSITE profilePS5081129.631282348IPR003657WRKY domain
SMARTSM007743.1E-37287347IPR003657WRKY domain
PfamPF031066.1E-27289346IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    Send to blast
MDKGGAGALR LGTSESVGFL ASRSFLSPNH GGGLKSRHSM DSGDHFPTAI EFPVTLNYRR  60
GDTVEDPPGK RRVDEMDFFS NEKKRSREEP DLDLKVPSLS IKKEDLNIDL ASMQAELSRM  120
NEENQRLRGM LNQVTTNYNA LQMQLVVLMQ QRKQKDGSSQ EHEAMDEKTD GKIVPRQFMD  180
LGLAANTDEP SQSSIEGGGR ERSSSPTNNV EAGSMEYRLK KNNANKEIVP LDHERSNRDD  240
SPDPSSEGWN PNKASKLASP KSEEQTQEAT MRKARVSVRA RSEAPMITDG CQWRKYGQKM  300
AKGNPCPRAY YRCTMATGCP VRKQVQRCAE DRSILITTYE GNHNHPLPPA AMAMASTTSA  360
AASMLLSGSM SSADGLINSN FLARTVLPCS SSLATISASA PFPTVTLDLT HNPNPLQFQR  420
LPAQFQLPLP NGTPAFGGPP QPPALPQIFG QALNSQSTFS GLQMSPNMDG AQFPHPKPPS  480
ATSLADTVSA ATAAITADPT FKAALAAAIT SIIGGGHQPN SNNSSSVNNT TSNGNTKPAN  540
SNFLAT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-22274350176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010926195.10.0probable WRKY transcription factor 31 isoform X2
SwissprotQ9XEC31e-122WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A2H3X8C60.0A0A2H3X8C6_PHODC; probable WRKY transcription factor 31 isoform X2
STRINGXP_008779787.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-100WRKY family protein