PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010926186.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family CO-like
Protein Properties Length: 430aa    MW: 47050.9 Da    PI: 6.0525
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010926186.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box16.42e-05234335
        zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHk 35
                    e+ C+ +  +++  +C+++   lC  C + +H+
  XP_010926186.1  2 EPLCEFCWTQRALVYCKSDAARLCLPCDSFIHS 34
                    689****************************95 PP

2zf-B_box21.26e-074690439
        zf-B_box  4 rkCpeHeekelqlfCedCqqllCedCllee.........HkgHtv 39
                     +C+++ ++++   C d++  lC+dC   +         H++Htv
  XP_010926186.1 46 LICDRCLSQPAAVRCLDDRLSLCQDCDWGSpgcpgpghrHRRHTV 90
                    69*************************999999999966666876 PP

3CCT64.62.8e-22374417144
             CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                     R++a++RY+eK+k+R+F K+irY+sRKa+A++R+RvKGrFvk+ 
  XP_010926186.1 374 RNEAKMRYNEKKKSRLFGKQIRYASRKARADTRKRVKGRFVKAG 417
                     99***************************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003363.5E-8147IPR000315B-box-type zinc finger
PROSITE profilePS501198.774147IPR000315B-box-type zinc finger
CDDcd000215.39E-5347No hitNo description
CDDcd000212.89E-64790No hitNo description
PfamPF062032.8E-17374416IPR010402CCT domain
PROSITE profilePS5101714.674374416IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MEPLCEFCWT QRALVYCKSD AARLCLPCDS FIHSANALSR RHLRALICDR CLSQPAAVRC  60
LDDRLSLCQD CDWGSPGCPG PGHRHRRHTV NCYSGCPSLP ELSRMWSSVL DIPPVRGKAG  120
GPGMVTIDEN NASTCWEPGE DASSVGLPMV GMLGDLEPCA KFDPWMASSS SMMPEIGSMT  180
PCGGEQQGLF HKESNVPKLG CPPFRDLGIC DEDELCEGFG TGDRGFSNDN NEMFGCPQNL  240
PRYPFQEAGS DGFLTEKNFS VADSNGHIDH AVEVSSSVQH DCMTLQSSRM VGPAGAVQAL  300
NSNPDQLLLN FNGNRNVSLY FPSGNVCPNI SLSLSNLTGE SSAADYQDCG VSPMFLTGES  360
PWDSNLETGR PQARNEAKMR YNEKKKSRLF GKQIRYASRK ARADTRKRVK GRFVKAGEAY  420
DYDPLLARSN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010926186.10.0putative zinc finger protein CONSTANS-LIKE 11 isoform X1
TrEMBLA0A3Q0HUX20.0A0A3Q0HUX2_PHODC; putative zinc finger protein CONSTANS-LIKE 11
STRINGXP_008782231.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20793788
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21880.11e-90B-box type zinc finger protein with CCT domain