PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010924808.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 355aa    MW: 38354.9 Da    PI: 6.5503
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010924808.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_170.23.1e-22213275163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkrerrkq+NRe+ArrsR+RK+ae+eeL+ kv+ L aeN+aL++e+++l+++++kl+ e+
  XP_010924808.1 213 ERELKRERRKQSNRESARRSRLRKQAETEELAMKVDILGAENMALRSEISRLSEKSDKLRLEN 275
                     89*********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077776.3E-17167IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165967.7E-14105201No hitNo description
Gene3DG3DSA:1.20.5.1705.1E-16209272No hitNo description
PfamPF001701.1E-20213275IPR004827Basic-leucine zipper domain
SMARTSM003382.1E-20213277IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.863215278IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.81E-10216271No hitNo description
CDDcd147021.32E-18218269No hitNo description
PROSITE patternPS000360220235IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MENDEAGTPP KFDKELSSMQ EKPAIRLYPD WMAMQAYYGP AVAMPQPFFS TSVAPGHARH  60
PYLWGPQGSQ MQCQGITPSP TIGETVVMAT PLSTEMPAKL PSNKDKGLMK KLKRFDGLAV  120
SMGNGDAENR GGDMNGLSQS EDDSVEGSSD GSDGNNAGGN KTGRKQSSED IRATGNGKVD  180
TQANAAHGVE TNAPSKMSLG VTVAPANISR KDERELKRER RKQSNRESAR RSRLRKQAET  240
EELAMKVDIL GAENMALRSE ISRLSEKSDK LRLENSTLME KLKTAQSSQA EEMSTAKMET  300
EGAPSVVAEN FLSVIDNSTL VRASMKQQGE ACETSSGKLH QLLDSKPRTD AVAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1229235RRSRLRK
2229236RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010924805.10.0G-box-binding factor 3 isoform X3
TrEMBLA0A2H3Y0540.0A0A2H3Y054_PHODC; G-box-binding factor 3-like isoform X1
STRINGXP_008791471.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.12e-60G-box binding factor 3