PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010924706.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

BES1

Protein Properties

Length: 339aa MW: 36240.1 Da PI: 8.5507

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010924706.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	204	4.3e-63	3	150	2	148
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeae.aagssasaspesslq 95 +++r ptw+ErEnnkrRERrRRaiaakiy+GLR++Gn+klpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e+++ +g sas sp++s+q XP_010924706.1 3 SGTRLPTWRERENNKRRERRRRAIAAKIYTGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVERMDvGVGGSASPSPCTSYQ 97 689**********************************************************************777626799******* PP DUF822 96 sslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvss 148 s+++s+ +sp +s+ +sp+ss + ++ + ++ ++ +s +p+l++ls++ss XP_010924706.1 98 PSPRASYNHSPPSSSLPSPSSSYITNTNNNNANKGTDGNSHIPWLKNLSSASS 150 66666666666666666666666666666666666666********98766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	6.1E-65	3	146	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence Send to blast
MPSGTRLPTW RERENNKRRE RRRRAIAAKI YTGLRMYGNF KLPKHCDNNE VLKALCNEAG 60 WTVEEDGTTY RKGCKPVERM DVGVGGSASP SPCTSYQPSP RASYNHSPPS SSLPSPSSSY 120 ITNTNNNNAN KGTDGNSHIP WLKNLSSASS TSCLKPPNHH FYIHGGSISA PVTPPLSSPT 180 ARSPRVKADW DDPAAQPPWA GAHYTFLPSS TPPSPGRQVI PDAAWLAGLR LPSGGPSSPT 240 YSLVSSNPFG FCNEASAGAG SSRMWTPGQS GACSPVPGGH ADVRMCNGIS DEFAFGSSCN 300 GNLQSNGLVK PWEGERIHEE CASDELELTL GSSRTRADA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	5e-24	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	5e-24	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	5e-24	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	5e-24	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010924706.1	0.0	protein BZR1 homolog 3
Swissprot	Q5Z9E5	1e-133	BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBL	A0A2H3Y2E9	1e-178	A0A2H3Y2E9_PHODC; protein BZR1 homolog 3-like
STRING	XP_008792311.1	1e-179	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-105	BES1/BZR1 homolog 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]