PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010923469.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 309aa    MW: 33699.2 Da    PI: 10.4207
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010923469.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY29.81.2e-09290308321
                     -SS-EEEEEEE--TT-SS- CS
            WRKY   3 DgynWrKYGqKevkgsefp 21 
                     D+y+WrKYGqK++kgs++p
  XP_010923469.1 290 DEYSWRKYGQKPIKGSPHP 308
                     9****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105339.6E-19241286IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.804.4E-9276308IPR003657WRKY domain
PROSITE profilePS5081111.818283309IPR003657WRKY domain
SuperFamilySSF1182907.72E-7286308IPR003657WRKY domain
PfamPF031061.1E-5290308IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MEQVEEANRA AVESCHGLLS LLSQSQDQVQ YRNLVAETGE AVSRFKRVAS MLSDGVGHAR  60
VRIVKGVQSP FHHKVFLDHP LVLSEIDPSP KPLQLLPKSL LDTSAPELGS SAKNSQQLTQ  120
KILFENPGLD LNSSSSRSTL QLAPQGPPTA AHFQFLQQQQ NNQRFQLQQQ IKFQADMFRR  180
SNGGINLKFD SSSCTPTASS ARSFLSSLSM DGSVASLDGK AFHLIGGPAA SDPVSTHLPP  240
KRRCSGRGED GNGKCATAGR CHCSKRRKLR VKRSIKVPAI SNKLADIPPD EYSWRKYGQK  300
PIKGSPHPS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010923469.10.0protein WRKY1 isoform X2
TrEMBLA0A2H3YYT40.0A0A2H3YYT4_PHODC; protein WRKY1-like isoform X1
STRINGXP_008805954.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04670.26e-59WRKY DNA-binding protein 39