PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010923251.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family MYB_related
Protein Properties Length: 791aa    MW: 87129.8 Da    PI: 5.5991
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010923251.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.61.2e-075597347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +WT +E+e + +a +q G++ +++I  +++  +   q++++++ +
   XP_010923251.1 55 AWTRQEEENFFNALRQVGKN-FEKITCRVQ-SKNKDQVRHYYYRL 97
                     6*****************99.*********.***********976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466897.26E-1047102IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.4E-550100IPR009057Homeodomain-like
PROSITE profilePS5129312.69451102IPR017884SANT domain
SMARTSM007175.1E-552100IPR001005SANT/Myb domain
PfamPF002491.6E-55597IPR001005SANT/Myb domain
CDDcd001672.94E-55598No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 791 aa     Download sequence    Send to blast
MKISTPMGSQ VDMELRTPLA EHVLMKEADF AFPSSSPMTV ATQKPAKKPT RQWAAWTRQE  60
EENFFNALRQ VGKNFEKITC RVQSKNKDQV RHYYYRLVRR MNKLLGPGFY LDAKNSKDTN  120
AAMLRWWSLL EKYSCTASKL HLKPRRFKIF VEALENQLLK DRNKTKRRRP HGDIYSSTPS  180
TQVVSRAPGN DARSLKLLTV DAQTTNKVGA TKGASFKRNV NANMNFSKGD SSMKTAKQKR  240
RTGVVASAEY RSWEEAAMAG VSLVADAAEQ LERAANERNG FSDGGTCNML PKEMYNSNNE  300
ICSHQIKETI MQPHVKLKLQ LFPIDEGTRK ALEKDAHNPH LELTLSARKK ISSVLDHLNR  360
KWGNSSIASG ELMLFPYNVQ LVELASCRRW TIKDTAASAA DVYATIGSPA VFRLRYGWFS  420
SAELRSGTFH VPSPDIQSEN CMLSKGILNG NNIMNGPDAK CINADAPPIT EFVGQPQQLS  480
EDQQTSVIAL ATSNIDPPEP MNEVNCVEPM DELPENSGRS PFSTSGEETK DLSGGPQQED  540
EVNAGMKCVI LSAGEWADSL TNISVGDLLS EASKAAKDGC LNSPAGASVS CLQQIQFSCD  600
SFDAAIAAHI SGHQLLPPTM QASHASIWNA EETCDEFSFP AMQQDGSKPS TNSSVEACRE  660
ITYPSSLGFQ DYLKELAESR PADDPSQECL TAEPESDKDL SFDDRDNPQK DPCLQDIYWP  720
DSLGPLDLDI PSPRYHGQDL GFGDSLSGLS RLIASSLDAF QNCSFFSLEK ESSATGACGA  780
SFLLDDKVPG E
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010923251.10.0TSL-kinase interacting protein 1
RefseqXP_019705927.10.0TSL-kinase interacting protein 1
RefseqXP_019705942.10.0TSL-kinase interacting protein 1
RefseqXP_019705958.10.0TSL-kinase interacting protein 1
RefseqXP_019705966.10.0TSL-kinase interacting protein 1
RefseqXP_019705975.10.0TSL-kinase interacting protein 1
RefseqXP_019705993.10.0TSL-kinase interacting protein 1
RefseqXP_029121969.10.0TSL-kinase interacting protein 1
TrEMBLA0A2H3Y0630.0A0A2H3Y063_PHODC; TSL-kinase interacting protein 1 isoform X2
STRINGXP_008791198.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54783643
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36960.20.0TSL-kinase interacting protein 1