PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010922591.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

G2-like

Protein Properties

Length: 361aa MW: 41000.3 Da PI: 6.6821

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010922591.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	94.5	8.2e-30	59	114	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsek..AtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH +Fv+a+e LGG+++ AtPk +l+lm+vkgL+++hvkSHLQ+YR+ XP_010922591.1 59 PRLRWTPELHLCFVHAIETLGGQDRagATPKMVLQLMNVKGLSIAHVKSHLQMYRS 114 9*********************9445*************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	9.724	55	117	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	3.0E-28	55	115	IPR009057	Homeodomain-like
SuperFamily	SSF46689	3.23E-14	56	115	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.7E-21	58	116	IPR006447	Myb domain, plants
Pfam	PF00249	1.3E-7	60	113	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence Send to blast
MGSMSSESSR KSLSKVDEVE EDGVNNLRHG GSSSNSTVEE SGRKASSGTV RQYVRSKNPR 60 LRWTPELHLC FVHAIETLGG QDRAGATPKM VLQLMNVKGL SIAHVKSHLQ MYRSKKIDDS 120 GQVIADPRSV MQGREQHINN LSHLPMLHSF HQWPISNSRF DDYFWASPRN WMHNQVLGRA 180 MNSTGEPRSY GSITEMVFRG GDRLKSNQDF HTKDSSLDHR ASRELCEASG LHDYRLAATQ 240 YRPQERETCF ITQFQETNPQ GQSSMRWKAD DHGPDLNLSL NIGPRREKKQ RWEEEEEGGG 300 GEEEEEEEEE VDSSLSLSLF SPSRIERCSR DAEKASKHNR WEEEVGKGKN ARVTSTLDLT 360 I

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence Send to blast

MGSMSSESSR KSLSKVDEVE EDGVNNLRHG GSSSNSTVEE SGRKASSGTV RQYVRSKNPR  60
LRWTPELHLC FVHAIETLGG QDRAGATPKM VLQLMNVKGL SIAHVKSHLQ MYRSKKIDDS  120
GQVIADPRSV MQGREQHINN LSHLPMLHSF HQWPISNSRF DDYFWASPRN WMHNQVLGRA  180
MNSTGEPRSY GSITEMVFRG GDRLKSNQDF HTKDSSLDHR ASRELCEASG LHDYRLAATQ  240
YRPQERETCF ITQFQETNPQ GQSSMRWKAD DHGPDLNLSL NIGPRREKKQ RWEEEEEGGG  300
GEEEEEEEEE VDSSLSLSLF SPSRIERCSR DAEKASKHNR WEEEVGKGKN ARVTSTLDLT  360
I

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	2e-15	60	116	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-15	60	116	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-15	60	116	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-15	60	116	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
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Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010922593.1	0.0	uncharacterized protein LOC105045864
TrEMBL	A0A3Q0HQN8	1e-154	A0A3Q0HQN8_PHODC; transcription repressor KAN1-like isoform X1
TrEMBL	A0A3Q0IAJ9	1e-155	A0A3Q0IAJ9_PHODC; probable transcription factor KAN4 isoform X1
STRING	GSMUA_Achr7P22410_001	6e-91	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4408	36	71

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	5e-41	G2-like family protein