PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010922356.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Dof

Protein Properties

Length: 296aa MW: 30701.3 Da PI: 9.6105

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010922356.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125	2.3e-39	23	83	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e alkcprCdstntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+++ XP_010922356.1 23 PEPALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTK 83 67899*****************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-34	7	76	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	8.3E-33	26	81	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.739	27	81	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	29	65	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence Send to blast
MAAGLARPVS MTDRARLAKI PQPEPALKCP RCDSTNTKFC YFNNYSLSQP RHFCKTCRRY 60 WTRGGALRNV PVGGGCRRNK RTKSSGSSSK SSTTADRHAA TSSSTSSTGT SGGGAILPNI 120 APPAGQLPPF MASLHPLADY GGSSNLGLSF TGMQPMEQLD YQVGSSSSIG LEQWRLQQIQ 180 QFPFLGGLEA PPAPPSQPVP VLYPLDGESG GEGFAGQLLP KVSAGSGLIT QLASVKMEDN 240 PQGLNLPRQY LGFPGNNHYW GGSTGGAGAG AGSGGSAGWT GDLSGFNSSS TSGNIL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010922356.2	0.0	dof zinc finger protein DOF5.1
TrEMBL	A0A2H3YRJ6	1e-139	A0A2H3YRJ6_PHODC; dof zinc finger protein DOF5.1-like isoform X1
TrEMBL	A0A2H3ZVV0	1e-139	A0A2H3ZVV0_PHODC; dof zinc finger protein DOF5.1-like isoform X2
STRING	XP_008802760.1	1e-140	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4893	29	61

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.2	2e-47	OBF-binding protein 3