PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010922090.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 466aa    MW: 51008.3 Da    PI: 8.6686
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010922090.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.92.5e-09181218542
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 
                     k  rr+++NReAAr+sR+RKka++++Le    +L +  
  XP_010922090.1 181 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLNQLE 218
                     7889************************8655554444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.0E-7170223No hitNo description
SMARTSM003388.5E-7177240IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.37179223IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.19E-6181223No hitNo description
PfamPF001702.0E-6181220IPR004827Basic-leucine zipper domain
CDDcd147082.73E-21181233No hitNo description
PROSITE patternPS000360184199IPR004827Basic-leucine zipper domain
PfamPF141441.1E-34263338IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MGSRRGGAGV EDVKEAKRGM PSFVSALPGA HHIETEGNSM QPSRVSGLAA IEQSIGFRIE  60
DAVDLSRNPL FNPKSSGQSS DPLQFGAFSK PLASTDITPA AARIGSLAVL QQKGQQPNLV  120
SSSSGHIENW GESTMGDASP KTDTSTDVDT DDKNQRLEKG QAAVAAASDS SDKSKDKLDQ  180
KTLRRLAQNR EAARKSRLRK KAYVQQLESS RLKLNQLEQE LQRARQQGIF ISSSGDQSHS  240
MGGNGALAFD MEYARWLEEH HRQINELRAA VNSHASDNDL RAIVDSIMAH YDEIFRLKSV  300
AAKADVFHML SGMWKTPAER CFLWLGGFRS SELLKLLANQ LEPLTEQQLV GICNLQQSSQ  360
QAEDALSQGM EALQQSLAET LASGSLGPTG SSGNVANYMG QMAMAMGKLG TLENFLRQAD  420
NLRQQTLQQM LRILTTRQSA RALLAIHDYF SRLRALSSLW LARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010922090.20.0transcription factor TGA2.3
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A2H3XTA80.0A0A2H3XTA8_PHODC; transcription factor TGA2.3-like isoform X2
STRINGXP_008788486.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-144bZIP family protein