PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010921469.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 296aa    MW: 32807.1 Da    PI: 7.5762
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010921469.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.84.9e-17115163254
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     +ykGVr+++ +g+W+AeIrdp    +r  r +lg+++taeeA  a+ aa ++l 
  XP_010921469.1 115 RYKGVRQRR-WGKWAAEIRDP----IRgVRLWLGTYDTAEEASDAYQAASRRLQ 163
                     7*****998.**********7....246*********************99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.03E-24115162No hitNo description
PROSITE profilePS5103219.981115172IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-22115169IPR001471AP2/ERF domain
PfamPF008471.3E-10115162IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-16115166IPR016177DNA-binding domain
SMARTSM003801.2E-20115178IPR001471AP2/ERF domain
PRINTSPR003672.0E-9116127IPR001471AP2/ERF domain
PRINTSPR003672.0E-9138154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MEDKMMMRAS RKNNPRDVVF PKSKFFQSKP VRRKIRVLFT DPDATDSSSS EEDGEMMTMG  60
FVPKKKTKRI IHDIVITSFP STTSLTPVSK IPKTPKAHKT KTLRSINSSC TPTRRYKGVR  120
QRRWGKWAAE IRDPIRGVRL WLGTYDTAEE ASDAYQAASR RLQEEKQRLL RPSISSTSPV  180
SENSEGPLSA PSPSSVLDVA LSGSNLATAK NSHSPRAVEE VAPGTNNSSV AKEAAVEEKP  240
VCELFDEQQL EIPHLDFGLD SDAFLVGELG EDLLGLDDLP LWTQPLDGGD FSFLDA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-13114172160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A2e-13114172463ATERF1
3gcc_A2e-13114172463ATERF1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010921469.10.0ethylene-responsive transcription factor ERF073
RefseqXP_019704363.10.0ethylene-responsive transcription factor ERF073
RefseqXP_029122362.10.0ethylene-responsive transcription factor ERF073
RefseqXP_029122364.10.0ethylene-responsive transcription factor ERF073
RefseqXP_029122369.10.0ethylene-responsive transcription factor ERF073
RefseqXP_029122371.10.0ethylene-responsive transcription factor ERF073
TrEMBLA0A2H3YIB11e-113A0A2H3YIB1_PHODC; ethylene-responsive transcription factor CRF2-like
STRINGXP_008799235.11e-113(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50203763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.21e-20ERF family protein