PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010921342.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family CAMTA
Protein Properties Length: 1091aa    MW: 121630 Da    PI: 7.5677
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010921342.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1173.14e-54201352117
            CG-1   2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 
                     l+ k+rwl+++ei++iL n++k +l+++++ rp+ gsl+L++rk +ryfrkDG++w+kk+dgktvrE+hekLK g+v+vl+cyYah+e+n++fqr
  XP_010921342.1  20 LEAKTRWLRPSEICEILRNYQKLNLATDPPYRPPGGSLFLFDRKALRYFRKDGHNWRKKRDGKTVREAHEKLKCGSVDVLHCYYAHGEDNENFQR 114
                     5679******************************************************************************************* PP

            CG-1  97 rcywlLeeelekivlvhylev 117
                     r+yw+L+ +le+ivlvhy++v
  XP_010921342.1 115 RSYWMLDGQLEHIVLVHYRDV 135
                     *******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143779.35315141IPR005559CG-1 DNA-binding domain
SMARTSM010764.3E-7818136IPR005559CG-1 DNA-binding domain
PfamPF038593.9E-4921135IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.105.8E-6523612IPR013783Immunoglobulin-like fold
CDDcd001028.07E-5524611No hitNo description
PfamPF018334.3E-4525609IPR002909IPT domain
SuperFamilySSF812961.04E-16525610IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.201.7E-14688815IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484039.67E-15706815IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029716.308709824IPR020683Ankyrin repeat-containing domain
CDDcd002041.61E-12709812No hitNo description
PROSITE profilePS500888.843753785IPR002110Ankyrin repeat
SMARTSM002480.19753782IPR002110Ankyrin repeat
SMARTSM00248380792821IPR002110Ankyrin repeat
SMARTSM00015280874896IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.529875904IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525402.02E-7877980IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000152929951IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.407930959IPR000048IQ motif, EF-hand binding site
PfamPF006120.0048932950IPR000048IQ motif, EF-hand binding site
SMARTSM000152.7E-4952974IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.578954981IPR000048IQ motif, EF-hand binding site
PfamPF006123.9E-5955974IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.68710341062IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1091 aa     Download sequence    Send to blast
MADGRRYSLD PQLDITQILL EAKTRWLRPS EICEILRNYQ KLNLATDPPY RPPGGSLFLF  60
DRKALRYFRK DGHNWRKKRD GKTVREAHEK LKCGSVDVLH CYYAHGEDNE NFQRRSYWML  120
DGQLEHIVLV HYRDVNEGSR SAVPHLSNTD STRVHSIQGT QANSALYSSH LNSATFTSEA  180
SYASKCGAAD WNGHTPSCKF ENADSGEEFG GGPRTDSVSC SGLEMAGTDV AEENTVGCSG  240
SSHLYPRGFV NSAGSSIGPS FVNQVLLQNF LISKDQKTHG ASQGAGSFSG DCFNCHGSSA  300
GWSDFLSISR RNGGKQEQNI SFAHQNCPDN MQRRIASSAS SDHSMVNHAT DNGYNIISSA  360
NPQIFTGVGK RNDQMKEENA ENVNRFDDKC LVNESTHMYQ MSHDHCHRIA SQFKNNMGSQ  420
MNISVPDQPL EYEAEVSNAS KKPLQSDAHN TEHGGLKKLD SFGRWMNKEI GKDCDDSLMA  480
SDSCSYWNAL DSQNDNKEVS SLSRHMRLDI DSLGPSLSQE QLFSIVDFSP DWAYSGVETK  540
VLISGTFLGS LEPRNIKWCC MFGELEVSAE VLTTNVLRCQ VPAHTPGRVP FYITRSDRLA  600
CSEIREFEYR ENVPGVSLVL KSEPEDEIYL EVRFAKLLSQ GLDRKKLFCS VENCPKCSLK  660
QKLFSMLNEP NEWKKIEDDS KAFQNCRDAL IQKILKGKLY EWLICKAHEE GKGPNFLDEE  720
GQGAIHLAAA LGYDWAMAPI VTTGVSPSFR DTRGRTGLHW AAYYGREGTV VALIRLGSAP  780
GAVEDPTSKF PQGQTAADLA SSRGHKGIAG YLAEADLTSH LSSLALKESV MESVSATLAA  840
QKAIETVQDQ NIDSLAGDQG EQLSLRGSLA AVRNSAQAAA RIQAAFRVHS FRQRQLTERK  900
DEEAGILDDV MMLSSLSNKF QRVSHFNEAL HTAATKIQQK YRGWKGRKEF LKVRDRIVKI  960
QAHVRGHQVR KQYKNVVWSV SIVEKAILRW RRKGAGLRGF RAENASSAAE QVVEKTDEYD  1020
FLRLGRKQKA AGVEKALARV QSMARQPEAR DQYMRLVACS RKLKLEDEKS SAAQVQNSEK  1080
VEEDQLALMI N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010921342.10.0calmodulin-binding transcription activator 1 isoform X2
TrEMBLA0A2H3Y4H50.0A0A2H3Y4H5_PHODC; calmodulin-binding transcription activator 1-like
STRINGXP_008793313.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60838140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.21e-161Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains