PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010920855.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

VOZ

Protein Properties

Length: 441aa MW: 49515.3 Da PI: 5.1376

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010920855.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	424.5	1.6e-130	151	367	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaael 95 pppsaflgpkcalwdc+rpaqgsew+qdycssfhatlalneg+pg++pvlrp+g+dlkd++lfaal ak+qgk+vgi +cegaatakspwn +el XP_010920855.1 151 PPPSAFLGPKCALWDCPRPAQGSEWCQDYCSSFHATLALNEGPPGMAPVLRPGGVDLKDSPLFAALCAKTQGKNVGILVCEGAATAKSPWNVPEL 245 89******************************************************************************************* PP VOZ 96 fdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklv 190 fdls+lege+irewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmke gg krsyymdpqp+++fewhlyeyei+++d+laly+le+k v XP_010920855.1 246 FDLSVLEGESIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKECGGSKRSYYMDPQPLTHFEWHLYEYEISNCDDLALYKLEFKFV 340 ******************************************************************************************* PP VOZ 191 dekksakgkvskdsladlqkklgrlta 217 d+kks+++k++ sl+dlq+++grl+a XP_010920855.1 341 DAKKSSRAKLTGTSLVDLQRQMGRLNA 367 **********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence Send to blast
GKAKAEPLDV PSELPSETLR LLQLSEEEDD ATSKLALPAP GKAKAEPLDV PEPYVEEIQG 60 GETAVFQEDY YVNQELTEHE FLYGERYKSN LHAGTDHAII NCLDRTAHLD YQQFSLHQEL 120 HHNVYLNTNS SEQNGEDVLP HMSDLLPTIC PPPSAFLGPK CALWDCPRPA QGSEWCQDYC 180 SSFHATLALN EGPPGMAPVL RPGGVDLKDS PLFAALCAKT QGKNVGILVC EGAATAKSPW 240 NVPELFDLSV LEGESIREWL FFDKPRRAFE SGNRKQRSLP DYSGRGWHES RKQVMKECGG 300 SKRSYYMDPQ PLTHFEWHLY EYEISNCDDL ALYKLEFKFV DAKKSSRAKL TGTSLVDLQR 360 QMGRLNAENS VDNKKNTKSR TKANQKGIAE SMYSSPHIAN QKENVLNFYH ASDQMVSLNE 420 NSAYGPSFQY VYSVEKDCYG T

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence Send to blast

GKAKAEPLDV PSELPSETLR LLQLSEEEDD ATSKLALPAP GKAKAEPLDV PEPYVEEIQG  60
GETAVFQEDY YVNQELTEHE FLYGERYKSN LHAGTDHAII NCLDRTAHLD YQQFSLHQEL  120
HHNVYLNTNS SEQNGEDVLP HMSDLLPTIC PPPSAFLGPK CALWDCPRPA QGSEWCQDYC  180
SSFHATLALN EGPPGMAPVL RPGGVDLKDS PLFAALCAKT QGKNVGILVC EGAATAKSPW  240
NVPELFDLSV LEGESIREWL FFDKPRRAFE SGNRKQRSLP DYSGRGWHES RKQVMKECGG  300
SKRSYYMDPQ PLTHFEWHLY EYEISNCDDL ALYKLEFKFV DAKKSSRAKL TGTSLVDLQR  360
QMGRLNAENS VDNKKNTKSR TKANQKGIAE SMYSSPHIAN QKENVLNFYH ASDQMVSLNE  420
NSAYGPSFQY VYSVEKDCYG T

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019706041.1	0.0	transcription factor VOZ1 isoform X3
Swissprot	Q9SGQ0	1e-151	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A2H3YGG0	0.0	A0A2H3YGG0_PHODC; transcription factor VOZ1 isoform X1
STRING	XP_008798279.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2343	38	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-150	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]