PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010920082.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family MYB_related
Protein Properties Length: 798aa    MW: 87521.5 Da    PI: 7.078
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010920082.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.62.4e-07732786146
                      TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqk 46 
                      +++WT +E+e l+dav+++  +      W++I +       k+R + ++k++w++
   XP_010920082.1 732 KLAWTVQEEEALKDAVQKFSVNsdgtlPWTKILEFGRrvfhKTRQPGDLKDKWRN 786
                      689******************************9999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579037.97E-11384453IPR011011Zinc finger, FYVE/PHD-type
PROSITE profilePS500168.556396445IPR019787Zinc finger, PHD-finger
Gene3DG3DSA:3.30.40.101.3E-9397445IPR013083Zinc finger, RING/FYVE/PHD-type
SMARTSM002492.2E-7398443IPR001965Zinc finger, PHD-type
PROSITE patternPS013590399442IPR019786Zinc finger, PHD-type, conserved site
PROSITE profilePS500907.015727788IPR017877Myb-like domain
SuperFamilySSF466891.79E-8729787IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.0E-7729788IPR009057Homeodomain-like
SMARTSM007170.0081731790IPR001005SANT/Myb domain
CDDcd116605.15E-11735787No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 798 aa     Download sequence    Send to blast
MATELLPWHW IVETLAQVEE LDASILETII CRDPDFSKNA PEIVRERVAL RYLEKLVPSS  60
SASGVPSTSA SFRANEPAVD VLKKVAGLCK LEKDKDKLHA PDLHQFILQK KASLPKSSLQ  120
LLSSTLEGHS QLLSSLKEPS GLCIHSRADC LRCSIDDDNQ RAKKLRLSRK DAEIQSPKQR  180
SPVTAHDGGT VTLQEDYPGS AQHVNKRNVS DGERINFSSG EIEPLIQTLA ASAPDGGKFN  240
LKQDSSRLGK GGEIQPLRQT SAAPPSDRND VNLQKDSSGL GQHLPKQNMP DAGSSHLHQD  300
IGSTGGDTIQ LLKDYSSLQN ASSDRSTKNV NPASGKTDLF SGVPSVMPEA SSDSDGACDV  360
PSDFNLCDVF DNEKHRLLTS QSLANHDSVT GDWTEQGLCI KCDNGGQLLS CSASGCSIGV  420
HESCLGPFVK VEKTGLFYCP FCSFRRAAIA YCKAREKLSS AKNALSAFLG KDPIPGHRKE  480
QSSPKVHRET SQADVAGNLS HQSAVPHADK LNVSFSTAQE EHQQLEVAKV CDKAKLCSKQ  540
MDNPSGVEGC DVSHNPVENK HDKMFKKVSF PDSEDADTII NVENELGNNS EHVWVAEHQQ  600
PTEPQEGIDN GNLPCEDRDT STGVHAHDVS KAKQNSNIDS ADDHLQTQHL KNQGQVEAFL  660
DHDTGHKSPS PQTSEKHRES RRQHAAVGEA CHTQGTVGDQ SWNKVSPGKN LKYRSRPKRY  720
SNPIIPSGRR KKLAWTVQEE EALKDAVQKF SVNSDGTLPW TKILEFGRRV FHKTRQPGDL  780
KDKWRNIQIK EGLRTRKT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010920082.10.0uncharacterized protein LOC105044011 isoform X2
TrEMBLA0A2H3WXL00.0A0A2H3WXL0_PHODC; uncharacterized protein LOC103695626
STRINGXP_008775217.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72740.28e-06MYB_related family protein