PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010919984.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family G2-like
Protein Properties Length: 336aa    MW: 37585.9 Da    PI: 9.3177
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010919984.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.23.2e-32172225255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  XP_010919984.1 172 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 225
                     9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.74E-15169225IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.4E-28170225IPR009057Homeodomain-like
TIGRFAMsTIGR015572.0E-23172225IPR006447Myb domain, plants
PfamPF002492.1E-7173224IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MELFPVQPDL SLQISPPNSK PTSGWSRSDE ALDLGFWRRA MDSASSSIKS STSTSTPKAN  60
TGGFDLSLAN PSVASNTNTT SYLPHQHHFH LHHHQKFLHD GYRQDLGSIR PIRGIPVYYN  120
PPSFSFLQNQ LNQQHLCDSS STASSIPYVV QGMPRSPRFL PRFPAKRGMR APRMRWTTTL  180
HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKTTD RPATSSDQTE  240
PIEISDDNLL NIHASEASVQ HERSGGSNST RSGLWNNTSR GGWFHDKPKD STTGSINSFE  300
DMQYKSFEMV SDLNSSCVSE MSTKKPNLEF TLGRPH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-16173227458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-16173227458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-16173227458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-16173227458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-16173227458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-16173227458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-16173227458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-16173227458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010919984.10.0probable transcription factor KAN2 isoform X2
TrEMBLA0A3Q0ICH30.0A0A3Q0ICH3_PHODC; probable transcription factor KAN2
STRINGXP_008800121.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17695.13e-55G2-like family protein