PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010919836.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

STAT

Protein Properties

Length: 662aa MW: 74136.5 Da PI: 5.9429

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010919836.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	186.7	2.9e-58	171	290	1	119
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkk 94 l vvl+na+g++v+k++e+vasL+yad+g++vek+ d aeapLL+sydG+e++s+drp++l+rGra+fklkisqLssk+dnrLfr++f++++ ++ XP_010919836.1 171 LHVVLANAFGRSVNKEMEIVASLVYADNGSPVEKTrDVAEAPLLTSYDGLEHPSTDRPVPLIRGRATFKLKISQLSSKSDNRLFRVCFRTMHAQT 265 68*******************************6679**************************************************** PP STAT 95 ypfleavskpirCisrsrntrsssl 119 ypflea+s+pirCisr+r++r+++l XP_010919836.1 266 YPFLEAYSHPIRCISRNRSNRPLAL 290 *******************9876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF55550	3.23E-7	555	627	IPR000980	SH2 domain
Gene3D	G3DSA:3.30.505.10	1.2E-5	556	622	IPR000980	SH2 domain
PROSITE profile	PS50001	9.693	559	622	IPR000980	SH2 domain

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence Send to blast
MTSENEDEVP FLALSEDNKL TLFPLMFLHE EAPSTSSSFP WTDMLHASAE IECPLEKWVH 60 VGCEVATNHM FLHIDGKLVG EESLTSLCSE HHFRDNLKRI SLAGNDGKLD GYVYNVQVLP 120 ISASITDQFV KKPPVKLSLD GSSIFDGVED GGDGVWSIVG GKASCRRNFC LHVVLANAFG 180 RSVNKEMEIV ASLVYADNGS PVEKTRDVAE APLLTSYDGL EHPSTDRPVP LIRGRATFKL 240 KISQLSSKSD NRLFRVCFRT MHAQTYPFLE AYSHPIRCIS RNRSNRPLAL GKRLASTTAL 300 FDEIHSGKGN DGSGVVQEIY GDDHFHILNQ SVLRCNTPSK HSKLENDKSP SSIDTSGILE 360 KDEISLKTSL EARSNNFEGT DGALSDSEST DARNYESRWT KEAMNPISDA VIFKYCLEDT 420 YERLMLLKDM LTSASDEDIT NFAEQVCLYA GCSHHRYQIL ISKRLLQEGV DTWNSITRNS 480 HHVLWTDVVP EIDKRFRNIA CSNRGLSGED LDVLRGIAGC GDQLGQEEFA RMWYWLYPVA 540 SALSNEQINA MWACLSPKWI EGLITREEAE IALKGSRGPQ KPGTFVLRFP TSRSWPHPDA 600 GSLVVTYVGA DSALHHKLLS LDYRKRTPDH FQSCFWKSLN YPNWEGFVDK GTPLARAENC 660 LW

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence Send to blast

MTSENEDEVP FLALSEDNKL TLFPLMFLHE EAPSTSSSFP WTDMLHASAE IECPLEKWVH  60
VGCEVATNHM FLHIDGKLVG EESLTSLCSE HHFRDNLKRI SLAGNDGKLD GYVYNVQVLP  120
ISASITDQFV KKPPVKLSLD GSSIFDGVED GGDGVWSIVG GKASCRRNFC LHVVLANAFG  180
RSVNKEMEIV ASLVYADNGS PVEKTRDVAE APLLTSYDGL EHPSTDRPVP LIRGRATFKL  240
KISQLSSKSD NRLFRVCFRT MHAQTYPFLE AYSHPIRCIS RNRSNRPLAL GKRLASTTAL  300
FDEIHSGKGN DGSGVVQEIY GDDHFHILNQ SVLRCNTPSK HSKLENDKSP SSIDTSGILE  360
KDEISLKTSL EARSNNFEGT DGALSDSEST DARNYESRWT KEAMNPISDA VIFKYCLEDT  420
YERLMLLKDM LTSASDEDIT NFAEQVCLYA GCSHHRYQIL ISKRLLQEGV DTWNSITRNS  480
HHVLWTDVVP EIDKRFRNIA CSNRGLSGED LDVLRGIAGC GDQLGQEEFA RMWYWLYPVA  540
SALSNEQINA MWACLSPKWI EGLITREEAE IALKGSRGPQ KPGTFVLRFP TSRSWPHPDA  600
GSLVVTYVGA DSALHHKLLS LDYRKRTPDH FQSCFWKSLN YPNWEGFVDK GTPLARAENC  660
LW

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010919835.1	0.0	SH2 domain-containing protein A isoform X1
TrEMBL	A0A2H3XJF7	0.0	A0A2H3XJF7_PHODC; SH2 domain-containing protein A-like isoform X2
TrEMBL	A0A3Q0HWN2	0.0	A0A3Q0HWN2_PHODC; SH2 domain-containing protein A-like isoform X1
STRING	XP_008784704.1	0.0	(Phoenix dactylifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	1e-162	SH2 domain protein B