PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010919835.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family STAT
Protein Properties Length: 720aa    MW: 80157.2 Da    PI: 5.5174
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010919835.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT186.53.3e-582343531119
            STAT   1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkk 94 
                     l vvl+na+g++v+k++e+vasL+yad+g++vek+ d aeapLL+sydG+e++s+drp++l+rGra+fklkisqLssk+dnrLfr++f++++ ++
  XP_010919835.1 234 LHVVLANAFGRSVNKEMEIVASLVYADNGSPVEKTrDVAEAPLLTSYDGLEHPSTDRPVPLIRGRATFKLKISQLSSKSDNRLFRVCFRTMHAQT 328
                     68*********************************6679******************************************************** PP

            STAT  95 ypfleavskpirCisrsrntrsssl 119
                     ypflea+s+pirCisr+r++r+++l
  XP_010919835.1 329 YPFLEAYSHPIRCISRNRSNRPLAL 353
                     *********************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.60.120.2003.3E-435180IPR013320Concanavalin A-like lectin/glucanase domain
SuperFamilySSF498991.55E-639181IPR013320Concanavalin A-like lectin/glucanase domain
SuperFamilySSF555505.39E-8618698IPR000980SH2 domain
Gene3DG3DSA:3.30.505.101.8E-5619684IPR000980SH2 domain
PROSITE profilePS500019.693622685IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 720 aa     Download sequence    Send to blast
MADKQCREED YSQLRDLRIS LNRGGEGGKG GGEEDGDSDS GFSLCFWLYL SSSARPSSVI  60
LRQMTSENED EVPFLALSED NKLTLFPLMF LHEEAPSTSS SFPWTDMLHA SAEIECPLEK  120
WVHVGCEVAT NHMFLHIDGK LVGEESLTSL CSEHHFRDNL KRISLAGNDG KLDGYVYNVQ  180
VLPISASITD QFVKKPPVKL SLDGSSIFDG VEDGGDGVWS IVGGKASCRR NFCLHVVLAN  240
AFGRSVNKEM EIVASLVYAD NGSPVEKTRD VAEAPLLTSY DGLEHPSTDR PVPLIRGRAT  300
FKLKISQLSS KSDNRLFRVC FRTMHAQTYP FLEAYSHPIR CISRNRSNRP LALGKRLAST  360
TALFDEIHSG KGNDGSGVVQ EIYGDDHFHI LNQSVLRCNT PSKHSKLEND KSPSSIDTSG  420
ILEKDEISLK TSLEARSNNF EGTDGALSDS ESTDARNYES RWTKEAMNPI SDAVIFKYCL  480
EDTYERLMLL KDMLTSASDE DITNFAEQVC LYAGCSHHRY QILISKRLLQ EGVDTWNSIT  540
RNSHHVLWTD VVPEIDKRFR NIACSNRGLS GEDLDVLRGI AGCGDQLGQE EFARMWYWLY  600
PVASALSNEQ INAMWACLSP KWIEGLITRE EAEIALKGSR GPQKPGTFVL RFPTSRSWPH  660
PDAGSLVVTY VGADSALHHK LLSLDYRKKD ARPLPELLLE EPELSQLGRV CRQGNAACQS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010919835.10.0SH2 domain-containing protein A isoform X1
TrEMBLA0A3Q0HWN20.0A0A3Q0HWN2_PHODC; SH2 domain-containing protein A-like isoform X1
STRINGXP_008784704.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75473135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17040.11e-172SH2 domain protein A