PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010919736.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family MYB_related
Protein Properties Length: 318aa    MW: 34028.5 Da    PI: 8.4989
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010919736.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.41.9e-1487131347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r + ++Rt+ q+ s+ qky
   XP_010919736.1  87 PWTEEEHRTFLAGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKY 131
                      8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129419.02480136IPR017930Myb domain
SuperFamilySSF466899.72E-1882137IPR009057Homeodomain-like
TIGRFAMsTIGR015572.4E-1883135IPR006447Myb domain, plants
SMARTSM007175.0E-1184134IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.4E-1286130IPR009057Homeodomain-like
CDDcd001679.55E-1087132No hitNo description
PfamPF002499.5E-1287131IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MEKGQLERRD KGLKLFGVRI VGDGGAGELE LEEEEVMRKS SSMGNLTSCT ADPAGDHVGG  60
EQGYLSDGGL HQSSKMRRRH ERKRGVPWTE EEHRTFLAGL EKLGKGDWRG ISRNFVTTRT  120
PTQVASHAQK YFLRQNNPGK KKRRSSLFDM VINDEAAVPE TASALSPKKP CEAKEETNNL  180
SLDKLLMGSP ALVTTQVASR GLDASSVSPL MASHGSITNI SSANLMVGIS DSSAGEQQVI  240
PTLSLISPLN VPEQVATVLQ ASTTCAPNFP KLSLPHPPST ATSSLVESSD LELSIAPPRP  300
HSLTKLSSQG VAGAIRVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1139143KKKRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010919736.10.0transcription factor KUA1
TrEMBLA0A2H3YHC11e-171A0A2H3YHC1_PHODC; transcription factor MYBS2-like
STRINGXP_008798808.11e-172(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58583652
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.15e-46MYB_related family protein