PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010919091.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

TALE

Protein Properties

Length: 599aa MW: 67182.3 Da PI: 6.464

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010919091.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.2	6.8e-09	366	403	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + XP_010919091.1 366 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 403 554459******************************88 PP
2	BELL	113.9	8.6e-37	229	298	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 el+k+kakLls+leeVd+rYk+y+eq+++v+ssFeavag g+a++Y lA+ka+S+hFrcLkd i++qi XP_010919091.1 229 LELKKRKAKLLSMLEEVDRRYKKYCEQMRAVVSSFEAVAGEGAATVYSMLASKAMSKHFRCLKDGIVGQI 298 5899****************************************************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00574	1.8E-50	166	296	IPR006563	POX domain
Pfam	PF07526	1.1E-42	172	294	IPR006563	POX domain
CDD	cd00086	1.28E-10	347	408	No hit	No description
SMART	SM00389	1.0E-8	347	411	IPR001356	Homeobox domain
SuperFamily	SSF46689	5.13E-17	348	413	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	4.2E-27	350	413	IPR009057	Homeodomain-like
Pfam	PF05920	7.9E-18	364	403	IPR008422	Homeobox KN domain
PROSITE profile	PS50071	11.548	366	407	IPR001356	Homeobox domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence Send to blast
MAHRQQEKPG TQISPAFGYV DFSSTSNSNI QSFESNQELY SLQAGMEMLG RGFIPKAGGL 60 ICPSSNENLM VTPAETAATT TTMNSWQHPN RMLVEDSSLR CLFPNGSNQQ PIRGLSLSLC 120 NPEPSESIAG MEQPILQQHL PTNSRDELFP KSTDLLQDRR FFQQFYQQPR QIKSFKFLIP 180 ARELLNEFCS LGGADNSSKQ KSCKANQWEE GGSSSGASRN QSLYSSDVLE LKKRKAKLLS 240 MLEEVDRRYK KYCEQMRAVV SSFEAVAGEG AATVYSMLAS KAMSKHFRCL KDGIVGQIQA 300 TKKAMGEKDP VAPGTTRGET PRLKLLDQCL RQQKAFQQVG TMESCPWRPQ RGLPECSVSI 360 LRAWLFEHFL HPYPSDVDKH ILARQTGLSR SQVSNWFINA RVRLWKPMVE EMYLEEIKEK 420 DKQTAQEEEE EEEEEDNRPG EIHSNRNPNP NSSSLQLHVE DQKPAPGELL NYSDSLSSIV 480 NSSHHRADGR EPTNSKSSYH YPRQHHPVPI GAMVLDFTSY GECSNQNFGD GVSLTLGLQQ 540 HNEGGMSLSF SPASQHSLFF SRAQMEDCQP GQFSILDGET QNLPYRNLMG AQLLHDLAG

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence Send to blast

MAHRQQEKPG TQISPAFGYV DFSSTSNSNI QSFESNQELY SLQAGMEMLG RGFIPKAGGL  60
ICPSSNENLM VTPAETAATT TTMNSWQHPN RMLVEDSSLR CLFPNGSNQQ PIRGLSLSLC  120
NPEPSESIAG MEQPILQQHL PTNSRDELFP KSTDLLQDRR FFQQFYQQPR QIKSFKFLIP  180
ARELLNEFCS LGGADNSSKQ KSCKANQWEE GGSSSGASRN QSLYSSDVLE LKKRKAKLLS  240
MLEEVDRRYK KYCEQMRAVV SSFEAVAGEG AATVYSMLAS KAMSKHFRCL KDGIVGQIQA  300
TKKAMGEKDP VAPGTTRGET PRLKLLDQCL RQQKAFQQVG TMESCPWRPQ RGLPECSVSI  360
LRAWLFEHFL HPYPSDVDKH ILARQTGLSR SQVSNWFINA RVRLWKPMVE EMYLEEIKEK  420
DKQTAQEEEE EEEEEDNRPG EIHSNRNPNP NSSSLQLHVE DQKPAPGELL NYSDSLSSIV  480
NSSHHRADGR EPTNSKSSYH YPRQHHPVPI GAMVLDFTSY GECSNQNFGD GVSLTLGLQQ  540
HNEGGMSLSF SPASQHSLFF SRAQMEDCQP GQFSILDGET QNLPYRNLMG AQLLHDLAG

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
4xrm_A	5e-16	353	411	5	63	Homeobox protein Meis2
4xrm_B	5e-16	353	411	5	63	Homeobox protein Meis2
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Plays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269\|PubMed:12244239, ECO:0000269\|PubMed:17693535, ECO:0000269\|PubMed:22786869}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010919091.1	0.0	homeobox protein BEL1 homolog
Refseq	XP_010919093.1	0.0	homeobox protein BEL1 homolog
Refseq	XP_010919094.1	0.0	homeobox protein BEL1 homolog
Refseq	XP_019705723.1	0.0	homeobox protein BEL1 homolog
Swissprot	Q38897	1e-120	BEL1_ARATH; Homeobox protein BEL1 homolog
TrEMBL	A0A2H3XGJ8	0.0	A0A2H3XGJ8_PHODC; homeobox protein BEL1 homolog
STRING	XP_008783445.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6398	35	47

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-120	TALE family protein

Publications ? help Back to Top
Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules. Development, 2016. 143(3): p. 422-6 [PMID:26700684] Lozano-Sotomayor P, et al. Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana. Plant J., 2016. 88(3): p. 437-451 [PMID:27402171]