PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010917679.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family TALE
Protein Properties Length: 671aa    MW: 73981.9 Da    PI: 6.5112
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010917679.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.62.4e-094334701954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yp+ +e+  LA+++gLt +qV++WF N R +
  XP_010917679.1 433 FEHflHPYPKDSEKLMLARQTGLTRSQVSNWFINARVR 470
                     664459******************************88 PP

2BELL122.22.2e-39296367172
            BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     erq+lq+k +kLl +l+eVd rYkqy++q+q+v+ssF+++ag g+akpYt+lAl++iS+hFrcL+dai +qi
  XP_010917679.1 296 ERQDLQNKVTKLLAMLDEVDSRYKQYYHQMQIVVSSFDIIAGFGAAKPYTALALQTISQHFRCLRDAIGGQI 367
                     799*****************************************************************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.0E-55217365IPR006563POX domain
PfamPF075262.4E-49223363IPR006563POX domain
PROSITE profilePS5007112.406411474IPR001356Homeobox domain
SMARTSM003891.0E-9414478IPR001356Homeobox domain
CDDcd000861.20E-12414475No hitNo description
SuperFamilySSF466891.45E-17415481IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.2E-28417480IPR009057Homeodomain-like
PfamPF059201.8E-17431470IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 671 aa     Download sequence    Send to blast
MATFYTSSTN QRDAMPNLCL RDPGHTPYPE PSITGNMLYL NYPSSSPYSD ALTGDAQSQQ  60
NSVELPVPTA MISQGSSVEG AHMVSSHLGK NAYNAWRDGR IEMSFMQTIG GPISGSGNLV  120
RNSVSNECQM GLQTQLGTLN GQNLSLQQSN VSTMQNQGLS LSLSTEILVP SFQYRPTSSD  180
ISLFGPHQSN LGNGGSCRDD DSGNKNMHAN LSPYGVSSHT SSVPNSKYLK AAQELLVEVV  240
NVRKALKHKA DNGQSVHSSA GTTGCKDTDG ASKSEGMPSN PQESTANSSS ELSPSERQDL  300
QNKVTKLLAM LDEVDSRYKQ YYHQMQIVVS SFDIIAGFGA AKPYTALALQ TISQHFRCLR  360
DAIGGQIRAT RKSLGEQDSS ISQGGGIARL RYIDQQLRQQ RAMQQFGMMQ QHSWRPQRGL  420
PESSVSILRA WLFEHFLHPY PKDSEKLMLA RQTGLTRSQV SNWFINARVR LWKPMIEDMY  480
KEEFGGTEID SNSSSENPPK CKDEIRSSED REDLQNFSAE RSQTNQLNDS KSKAIHTMDT  540
GRASASFQHE TNSNNAYMNL KLNEQRPTSD DGSLLQDTLT HSDGSGRYMA YQMAEVGRYG  600
NTGFSLTLGL QHCDGSVPIS NNQHRFLTVR GEDIYGAAAP IGADTADYEF MNMEDRQHRF  660
GSSNLQHDFV A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A7e-17420477158Homeobox protein Meis1
4xrs_B7e-17420477158Homeobox protein Meis1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029119531.10.0BEL1-like homeodomain protein 7 isoform X3
RefseqXP_029119532.10.0BEL1-like homeodomain protein 7 isoform X3
RefseqXP_029119533.10.0BEL1-like homeodomain protein 7 isoform X3
RefseqXP_029119534.10.0BEL1-like homeodomain protein 7 isoform X3
RefseqXP_029119535.10.0BEL1-like homeodomain protein 7 isoform X3
RefseqXP_029119536.10.0BEL1-like homeodomain protein 7 isoform X3
RefseqXP_029119539.10.0BEL1-like homeodomain protein 7 isoform X3
SwissprotQ9SIW11e-134BLH7_ARATH; BEL1-like homeodomain protein 7
TrEMBLA0A2H3ZE910.0A0A2H3ZE91_PHODC; BEL1-like homeodomain protein 7 isoform X1
STRINGXP_008812196.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16400.11e-129BEL1-like homeodomain 7
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]